RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 MYBP10242 640 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 TGFB3P10600 412 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 POU3F2P20265 443 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 PPM1AP35813 382 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 MPLP40238 635 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 POLGP54098 1239 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 RARSP54136 660 aaKnown RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 ZNF543Q08ER8 600 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 PGM5Q15124 567 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 ALDH1L2Q3SY69 923 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 FNDC3BQ53EP0 1204 aaKnown RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 CT47A1Q5JQC4 288 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 COLEC12Q5KU26 742 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 EEF1DP3Q658K8 133 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 VHLLQ6RSH7 139 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 METTL7BQ6UX53 244 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 CYP26C1Q6V0L0 522 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 CCNI2Q6ZMN8 369 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 KIAA0319LQ8IZA0 1049 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 KYQ8NBH2 561 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 ITFG1Q8TB96 612 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 PLEKHO2Q8TD55 490 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 DCAF4Q8WV16 495 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 TRAPPC12Q8WVT3 735 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 MBD6Q96DN6 1003 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 CHFRQ96EP1 664 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 CLMPQ9H6B4 373 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 NRDE2Q9H7Z3 1164 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 NCOA5Q9HCD5 579 aaKnown RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 MAN1C1Q9NR34 630 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 INTS7Q9NVH2 962 aaKnown RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 POLR3BQ9NW08 1133 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 DNAJB4Q9UDY4 337 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 PUF60Q9UHX1 559 aaKnown RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 TUBE1Q9UJT0 475 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 ST3GAL5Q9UNP4 418 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 PCDHB7Q9Y5E2 793 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 PCDHA2Q9Y5H9 948 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 TRPV2Q9Y5S1 764 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 ADGRG4Q8IZF6 3080 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 F8W810 466 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 PLD2O14939 933 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 MEFVO15553 781 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-208ENST00000521037 TSPAN6O43657 245 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 GPR32O75388 356 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 SURF6O75683 361 aaKnown RBP4.36□□□□□ -1.71
VPS13B-208ENST00000521037 TP53P04637 393 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-208ENST00000521037 CD3EP07766 207 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 CCR10P46092 362 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 SLC11A1P49279 550 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 METAP2P50579 478 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS13B-208ENST00000521037 SEMA3BQ13214 749 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 TTF1Q15361 905 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-208ENST00000521037 PLK5Q496M5 336 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 WWC2Q6AWC2 1192 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 UNC5AQ6ZN44 842 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-208ENST00000521037 ECHDC2Q86YB7 292 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 MIB1Q86YT6 1006 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 LRRC43Q8N309 656 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 AFAP1L2Q8N4X5 818 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 FAM26EQ8N5C1 309 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 GAB3Q8WWW8 586 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 FGF13Q92913 245 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 MTMR8Q96EF0 704 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 MBOAT7Q96N66 472 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 NELL2Q99435 816 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 KXD1Q9BQD3 176 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 TMEM47Q9BQJ4 181 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 EDEM2Q9BV94 578 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 KLC2Q9H0B6 622 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 NOL6Q9H6R4 1146 aaKnown RBP4.36□□□□□ -1.71
VPS13B-208ENST00000521037 LMAN1LQ9HAT1 526 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 PCDH18Q9HCL0 1135 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 C1orf112Q9NSG2 853 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 RBM12Q9NTZ6 932 aaKnown RBP4.36□□□□□ -1.71
VPS13B-208ENST00000521037 MARCH5Q9NX47 278 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 HSPBP1Q9NZL4 362 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 CDH7Q9ULB5 785 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 SF3B6Q9Y3B4 125 aaKnown RBP4.36□□□□□ -1.71
VPS13B-208ENST00000521037 PCDHGA5Q9Y5G8 931 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 NID2Q14112 1375 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 RALGAPA1Q6GYQ0 2036 aa4.36□□□□□ -1.71
VPS13B-208ENST00000521037 CRYBG3Q68DQ2 2970 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 USP9YO00507 2555 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-208ENST00000521037 CSMD2Q7Z408 3487 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 BCLAF3A2AJT9 711 aaKnown RBP4.35□□□□□ -1.71
VPS13B-208ENST00000521037 CLEC18AA5D8T8 446 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 M0R2C6 588 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 AGRPO00253 132 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 EXTL3O43909 919 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 DDHD2O94830 711 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 GNAI2P04899 355 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 GNAI3P08754 354 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 SPATA31D3P0C874 917 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 GNAT1P11488 350 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 KCNA2P16389 499 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 CPEP16870 476 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 ITPKBP27987 946 aa4.35□□□□□ -1.71
VPS13B-208ENST00000521037 GNALP38405 381 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms