RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 RUNX3Q13761 415 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 PSMD6Q15008 389 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 TMEM196Q5HYL7 178 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 FAM26FQ5R3K3 315 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 TRIM68Q6AZZ1 485 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 RIPOR1Q6ZS17 1223 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 UNC13DQ70J99 1090 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 TRAPPC11Q7Z392 1133 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 SPATA2LQ8IUW3 424 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 WDR49Q8IV35 697 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 SECISBP2LQ93073 1101 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 CHFRQ96EP1 664 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 EBF3Q9H4W6 596 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 KIF9Q9HAQ2 790 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 PARD6AQ9NPB6 346 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 CRTAC1Q9NQ79 661 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 GCNT4Q9P109 453 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 UXTQ9UBK9 157 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 CDH9Q9ULB4 789 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 NME7Q9Y5B8 376 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 VPS13AQ96RL7 3174 aa9.91□□□□□ -0.82
CTNNA1-221ENST00000520339 MYH15Q9Y2K3 1946 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 EIF1AYO14602 144 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 TRDMT1O14717 391 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 POLR2DO15514 142 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 RETP07949 1114 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 PDGFRBP09619 1106 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 ZSCAN22P10073 491 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 ARSAP15289 507 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 VAMP1P23763 118 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 CNR2P34972 360 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 CYP24A1Q07973 514 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 PDGFRLQ15198 375 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 TRIP4Q15650 581 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 LPAL2Q16609 132 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 BMT2Q1RMZ1 405 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 RSPO4Q2I0M5 234 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 EFHC2Q5JST6 749 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 ALG1LQ6GMV1 187 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 FSTL4Q6MZW2 842 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 PKN3Q6P5Z2 889 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 VSTM1Q6UX27 236 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 C4orf50Q6ZRC1 276 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 DGLUCYQ7Z3D6 616 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 ZNF438Q7Z4V0 828 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 NLRP8Q86W28 1048 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 LONP2Q86WA8 852 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 HSCBQ8IWL3 235 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 SCN4BQ8IWT1 228 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 MYLPFQ96A32 169 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 SPATA17Q96L03 361 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 SLC22A12Q96S37 553 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 CYP2S1Q96SQ9 504 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 SYT15Q9BQS2 421 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 MRPL45Q9BRJ2 306 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 BLZF1Q9H2G9 400 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 MAGEF1Q9HAY2 307 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 FBRSL1Q9HCM7 1045 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 MAGEC2Q9UBF1 373 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 DACH1Q9UI36 760 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 GMEB2Q9UKD1 530 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 PCDHA7Q9UN72 937 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 R3HCC1Q9Y3T6 440 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 KCNMB2Q9Y691 235 aa9.9□□□□□ -0.82
CTNNA1-221ENST00000520339 CACNA1AO00555 2505 aa9.9□□□□□ -0.83
CTNNA1-221ENST00000520339 UBE4BO95155 1302 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 TRAV19A0A0A6YYK7 116 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 PVALEFA0A1B0GWK0 134 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 MED19A0JLT2 244 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 PRR5-ARHGAP8B1AHC4 643 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 CLIC2O15247 247 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 TACC1O75410 805 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 F13A1P00488 732 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 DLATP10515 647 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 BDNFP23560 247 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 CASP1P29466 404 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 GNL1P36915 607 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 GALK1P51570 392 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 CYP2J2P51589 502 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 PSMC1P62191 440 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 ARHGAP8P85298 464 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 LMNB2Q03252 620 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 FAM160A1Q05DH4 1040 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 GRSF1Q12849 480 aaKnown RBP eCLIP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 SRSF5Q13243 272 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 SIM2Q14190 667 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 MTF1Q14872 753 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 MAPRE1Q15691 268 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 ZNF77Q15935 545 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 SNRNP35Q16560 246 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 TSNAXIP1Q2TAA8 658 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 FOXD4L6Q3SYB3 417 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 RESP18Q5W5W9 173 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 HEATR6Q6AI08 1181 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 ATL3Q6DD88 541 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 LAIR1Q6GTX8 287 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 CC2D1AQ6P1N0 951 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 FOXD4L3Q6VB84 417 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 WDR5BQ86VZ2 330 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 NELFCDQ8IXH7 590 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms