RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 UQCRBP14927 111 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CHN1P15882 459 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NAGAP17050 411 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PRKACAP17612 351 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 GAP43P17677 238 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CYP7A1P22680 504 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 RPS6KB1P23443 525 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 ANXA13P27216 316 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 HSD17B3P37058 310 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PBX1P40424 430 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CRKP46108 304 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NDUFA8P51970 172 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 SSTP61278 116 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 ESRRGP62508 458 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 POU5F1BQ06416 359 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF844Q08AG5 666 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 C2orf54Q08AI8 447 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PPP2R5BQ15173 497 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 EZH2Q15910 746 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CRY1Q16526 586 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMEM266Q2M3C6 531 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRMT5Q32P41 509 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 C5orf22Q49AR2 442 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 SEZ6Q53EL9 994 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 RBM20Q5T481 1227 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 RNASEH2BQ5TBB1 312 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NT5DC1Q5TFE4 455 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 RESP18Q5W5W9 173 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 BTBD8Q5XKL5 378 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 METTL2BQ6P1Q9 378 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 KIF6Q6ZMV9 814 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 C4orf50Q6ZRC1 276 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 DCDC5Q6ZRR9 648 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 LINC00299Q6ZSB3 139 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PEX26Q7Z412 305 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NME9Q86XW9 330 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 SIAH1Q8IUQ4 282 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMEM126BQ8IUX1 230 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NPLOC4Q8TAT6 608 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 MDM1Q8TC05 714 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLC2A14Q8TDB8 520 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 TSR2Q969E8 191 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 MCUR1Q96AQ8 359 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCDC127Q96BQ5 260 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF274Q96GC6 653 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCDC120Q96HB5 630 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 DYDC2Q96IM9 177 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 Q96M66 194 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 RUNDC3BQ96NL0 473 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PPP1R10Q96QC0 940 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PSD2Q9BQI7 771 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NEURL2Q9BR09 285 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCDC77Q9BR77 488 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PHF20Q9BVI0 1012 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 TDRD1Q9BXT4 1180 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 HSD3B7Q9H2F3 369 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 IFT22Q9H7X7 185 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 MARCH7Q9H992 704 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CD320Q9NPF0 282 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 FARSBQ9NSD9 589 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 DDX56Q9NY93 547 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CLIC5Q9NZA1 410 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 HACD3Q9P035 362 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 IGSF9Q9P2J2 1179 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 KLHL42Q9P2K6 505 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 UBA2Q9UBT2 640 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NKX1-2Q9UD57 310 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 ADD3Q9UEY8 706 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PRKAG3Q9UGI9 489 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMEM59LQ9UK28 342 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NFU1Q9UMS0 254 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 WBP11Q9Y2W2 641 aaKnown RBP5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 PCDHGB7Q9Y5F8 929 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 NFS1Q9Y697 457 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 MYH7P12883 1935 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 MYH13Q9UKX3 1938 aa5.01□□□□□ -1.61
HMGB1P19-201ENST00000517578 CDC42BPBQ9Y5S2 1711 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 PNPLA7Q6ZV29 1317 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 SALL3Q9BXA9 1300 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 CD109Q6YHK3 1445 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 SHPRHQ149N8 1683 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 MYH15Q9Y2K3 1946 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ARHGEF35A5YM69 484 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 NFIBO00712 420 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRDMT1O14717 391 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 FOXP2O15409 715 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ADCY6O43306 1168 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 B4GALT4O60513 344 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 FOXD2O60548 495 aaPredicted RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMCC2O75069 709 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 PHF2O75151 1096 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TSC22D2O75157 780 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 PAHP00439 452 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ASS1P00966 412 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ATP5BP06576 529 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 FAM228BP0C875 321 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZCCHC18P0CG32 403 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 MYBL1P10243 752 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ATF6P18850 670 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms