RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 R3HDM2Q9Y2K5 976 aaKnown RBP21.03■□□□□ 0.96
TRIO-223ENST00000515710 GBP1P32455 592 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 SLC11A1P49279 550 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 CACNA2D1P54289 1103 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 HDAC4P56524 1084 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 CBX1P83916 185 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 ELAVL2Q12926 359 aaKnown RBP21.02■□□□□ 0.96
TRIO-223ENST00000515710 SNX1Q13596 522 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 HLTFQ14527 1009 aaKnown RBP eCLIP21.02■□□□□ 0.96
TRIO-223ENST00000515710 TRADDQ15628 312 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 SLC25A52Q3SY17 297 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 DRICH1Q6PGQ1 229 aaPredicted RBP21.02■□□□□ 0.96
TRIO-223ENST00000515710 SND1Q7KZF4 910 aaKnown RBP eCLIP21.02■□□□□ 0.96
TRIO-223ENST00000515710 MAP7D3Q8IWC1 876 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 TTC13Q8NBP0 860 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 SLC2A13Q96QE2 648 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 VIPAS39Q9H9C1 493 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 TMEM30AQ9NV96 361 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 FAM53CQ9NYF3 392 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 OGFRQ9NZT2 677 aa21.02■□□□□ 0.96
TRIO-223ENST00000515710 MDM4O15151 490 aa21.02■□□□□ 0.95
TRIO-223ENST00000515710 ARSEP51690 589 aa21.02■□□□□ 0.95
TRIO-223ENST00000515710 LMNB2Q03252 620 aa21.02■□□□□ 0.95
TRIO-223ENST00000515710 MRPL58Q14197 206 aaKnown RBP21.02■□□□□ 0.95
TRIO-223ENST00000515710 VSIG1Q86XK7 387 aa21.02■□□□□ 0.95
TRIO-223ENST00000515710 LRRC43Q8N309 656 aa21.02■□□□□ 0.95
TRIO-223ENST00000515710 ATG4AQ8WYN0 398 aa21.02■□□□□ 0.95
TRIO-223ENST00000515710 IRGQQ8WZA9 623 aa21.02■□□□□ 0.95
TRIO-223ENST00000515710 POPDC2Q9HBU9 364 aa21.02■□□□□ 0.95
TRIO-223ENST00000515710 STAP1Q9ULZ2 295 aa21.02■□□□□ 0.95
TRIO-223ENST00000515710 TTC3P53804 2025 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 SCN5AQ14524 2016 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 GALTP07902 379 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 ADCY2Q08462 1091 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 RAB6CQ53S08 254 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 VARS2Q5ST30 1063 aaKnown RBP21.01■□□□□ 0.95
TRIO-223ENST00000515710 BBS12Q6ZW61 710 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 DDX42Q86XP3 938 aaKnown RBP eCLIP21.01■□□□□ 0.95
TRIO-223ENST00000515710 NDRG1Q92597 394 aaKnown RBP21.01■□□□□ 0.95
TRIO-223ENST00000515710 NT5C3BQ969T7 300 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 RAB6CQ9H0N0 254 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 DPH5Q9H2P9 285 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 MARCH5Q9NX47 278 aa21.01■□□□□ 0.95
TRIO-223ENST00000515710 GAS8O95995 478 aa21■□□□□ 0.95
TRIO-223ENST00000515710 ZBED1O96006 694 aa21■□□□□ 0.95
TRIO-223ENST00000515710 FGFR3P22607 806 aa21■□□□□ 0.95
TRIO-223ENST00000515710 LBX1P52954 281 aa21■□□□□ 0.95
TRIO-223ENST00000515710 CDH6P55285 790 aa21■□□□□ 0.95
TRIO-223ENST00000515710 NFE2Q16621 373 aaPredicted RBP21■□□□□ 0.95
TRIO-223ENST00000515710 LRRC26Q2I0M4 334 aa21■□□□□ 0.95
TRIO-223ENST00000515710 ERMARDQ5T6L9 678 aa21■□□□□ 0.95
TRIO-223ENST00000515710 FAM171A1Q5VUB5 890 aa21■□□□□ 0.95
TRIO-223ENST00000515710 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21■□□□□ 0.95
TRIO-223ENST00000515710 RHOBTB2Q9BYZ6 727 aa21■□□□□ 0.95
TRIO-223ENST00000515710 ACBD3Q9H3P7 528 aa21■□□□□ 0.95
TRIO-223ENST00000515710 STAU2Q9NUL3 570 aaKnown RBP eCLIP21■□□□□ 0.95
TRIO-223ENST00000515710 DRG1Q9Y295 367 aaKnown RBP21■□□□□ 0.95
TRIO-223ENST00000515710 SF3B1O75533 1304 aaKnown RBP eCLIP21■□□□□ 0.95
TRIO-223ENST00000515710 OR6C75A6NL08 312 aa21■□□□□ 0.95
TRIO-223ENST00000515710 LIASO43766 372 aa21■□□□□ 0.95
TRIO-223ENST00000515710 SULT1E1P49888 294 aa21■□□□□ 0.95
TRIO-223ENST00000515710 CDR1P51861 262 aa21■□□□□ 0.95
TRIO-223ENST00000515710 KRT81Q14533 505 aa21■□□□□ 0.95
TRIO-223ENST00000515710 PPP1R7Q15435 360 aa21■□□□□ 0.95
TRIO-223ENST00000515710 DCAF6Q58WW2 860 aa21■□□□□ 0.95
TRIO-223ENST00000515710 PM20D1Q6GTS8 502 aa21■□□□□ 0.95
TRIO-223ENST00000515710 GPRIN1Q7Z2K8 1008 aa21■□□□□ 0.95
TRIO-223ENST00000515710 NECAB2Q7Z6G3 386 aa21■□□□□ 0.95
TRIO-223ENST00000515710 FUBP3Q96I24 572 aaKnown RBP eCLIP21■□□□□ 0.95
TRIO-223ENST00000515710 NPY6RQ99463 290 aa21■□□□□ 0.95
TRIO-223ENST00000515710 CALN1Q9BXU9 219 aa21■□□□□ 0.95
TRIO-223ENST00000515710 MAK16Q9BXY0 300 aaKnown RBP21■□□□□ 0.95
TRIO-223ENST00000515710 RRN3Q9NYV6 651 aa21■□□□□ 0.95
TRIO-223ENST00000515710 ABHD14A-ACY1A0A1B0GW23 586 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 ZNF487B1APH4 448 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 CST8O60676 142 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 TIMP1P01033 207 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 CD48P09326 243 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 TFE3P19532 575 aaPredicted RBP20.99■□□□□ 0.95
TRIO-223ENST00000515710 ECHS1P30084 290 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 FAM193AP78312 1265 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 TFDP2Q14188 446 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 SLC39A12Q504Y0 691 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 ZNF280DQ6N043 979 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 FUT10Q6P4F1 479 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 BNIPLQ7Z465 357 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 RFX6Q8HWS3 928 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 FAM71BQ8TC56 605 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 SNRNP25Q9BV90 132 aaKnown RBP20.99■□□□□ 0.95
TRIO-223ENST00000515710 OXCT2Q9BYC2 517 aaPredicted RBP20.99■□□□□ 0.95
TRIO-223ENST00000515710 GPR62Q9BZJ7 368 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 FAM129AQ9BZQ8 928 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 TRIM31Q9BZY9 425 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 TET1Q8NFU7 2136 aa20.99■□□□□ 0.95
TRIO-223ENST00000515710 DGKIO75912 1065 aa20.98■□□□□ 0.95
TRIO-223ENST00000515710 USP17L7P0C7H9 530 aa20.98■□□□□ 0.95
TRIO-223ENST00000515710 CTCFP49711 727 aaPredicted RBP20.98■□□□□ 0.95
TRIO-223ENST00000515710 RABGGTBP53611 331 aa20.98■□□□□ 0.95
TRIO-223ENST00000515710 BCAR1P56945 870 aa20.98■□□□□ 0.95
TRIO-223ENST00000515710 KRT17Q04695 432 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms