RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 KIF26AQ9ULI4 1882 aaPredicted RBP12.12□□□□□ -0.47
VCAN-212ENST00000515397 FAM186AA6NE01 2351 aa12.12□□□□□ -0.47
VCAN-212ENST00000515397 MIA3Q5JRA6 1907 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 CYP17A1P05093 508 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 CCDC192P0DO97 292 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 SLC9A1P19634 815 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 MTIF2P46199 727 aaKnown RBP12.11□□□□□ -0.47
VCAN-212ENST00000515397 PXNP49023 591 aaPredicted RBP12.11□□□□□ -0.47
VCAN-212ENST00000515397 RGS7P49802 495 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 PDE6CP51160 858 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 MLLT6P55198 1093 aaPredicted RBP12.11□□□□□ -0.47
VCAN-212ENST00000515397 GRSF1Q12849 480 aaKnown RBP eCLIP12.11□□□□□ -0.47
VCAN-212ENST00000515397 CCINQ13939 588 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 DHCR24Q15392 516 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 SGO2Q562F6 1265 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 TMEM196Q5HYL7 178 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 C10orf120Q5SQS8 335 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 SNX30Q5VWJ9 437 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 ARHGAP17Q68EM7 881 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 CLEC17AQ6ZS10 378 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 BBS7Q8IWZ6 715 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 CPA6Q8N4T0 437 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 NAT16Q8N8M0 369 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 MLKLQ8NB16 471 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 OVCA2Q8WZ82 227 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 EZH1Q92800 747 aaPredicted RBP12.11□□□□□ -0.47
VCAN-212ENST00000515397 NKD2Q969F2 451 aaPredicted RBP12.11□□□□□ -0.47
VCAN-212ENST00000515397 FAXDC2Q96IV6 333 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 P2RY13Q9BPV8 354 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 ACP6Q9NPH0 428 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 TLR8Q9NR97 1041 aaKnown RBP12.11□□□□□ -0.47
VCAN-212ENST00000515397 COMMD8Q9NX08 183 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 NAGPAQ9UK23 515 aa12.11□□□□□ -0.47
VCAN-212ENST00000515397 MYOFQ9NZM1 2061 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 PRR23AA6NEV1 266 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 O00370 1275 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 TRDMT1O14717 391 aaKnown RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 PMM2O15305 246 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 RNF40O75150 1001 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 GABBR2O75899 941 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 FGFR1OPO95684 399 aaKnown RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 HMBSP08397 361 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 VDRP11473 427 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 LCP1P13796 627 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 TCF3P15923 654 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 TBXAS1P24557 533 aaPredicted RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 ATP5C1P36542 298 aaKnown RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 CXCL12P48061 93 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 TKTL1P51854 596 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 SEC13P55735 322 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 MARSP56192 900 aaKnown RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 YWHAEP62258 255 aaKnown RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 CETN1Q12798 172 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 NR1H3Q13133 447 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 SRSF5Q13243 272 aaKnown RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 LRRC32Q14392 662 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 ARHGAP44Q17R89 818 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 GAB4Q2WGN9 574 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 LY6G5CQ5SRR4 150 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 FOXR2Q6PJQ5 311 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 C12orf40Q86WS4 652 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 TMEM25Q86YD3 366 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 MIB1Q86YT6 1006 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 TTC39CQ8N584 583 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 RBBP8NLQ8NC74 664 aaPredicted RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 CD101Q93033 1021 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 KLF16Q9BXK1 252 aaPredicted RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 ULBP1Q9BZM6 244 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 DNAI2Q9GZS0 605 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 ZDHHC4Q9NPG8 344 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 SAMSN1Q9NSI8 373 aaKnown RBP12.1□□□□□ -0.47
VCAN-212ENST00000515397 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.1□□□□□ -0.47
VCAN-212ENST00000515397 SH3BP1Q9Y3L3 701 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 USP3Q9Y6I4 520 aa12.1□□□□□ -0.47
VCAN-212ENST00000515397 FAM170AA1A519 330 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 CHURC1-FNTBB4DL54 471 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 PROB1E7EW31 1015 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 TRIM24O15164 1050 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 P4HA2O15460 535 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 GREM1O60565 184 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 NFATC1O95644 943 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 KRT5P13647 590 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 PFKLP17858 780 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 USP8P40818 1118 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 OPRD1P41143 372 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 MAGEA9P43362 315 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 FNTBP49356 437 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 EFEMP1Q12805 493 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 LPAL2Q16609 132 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 DGKKQ5KSL6 1271 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 PMF1Q6P1K2 205 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 CCDC186Q7Z3E2 898 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 SPEM1Q8N4L4 309 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 DCLK2Q8N568 766 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 ATRIPQ8WXE1 791 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 EDEM1Q92611 657 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 BHMTQ93088 406 aa12.09□□□□□ -0.47
VCAN-212ENST00000515397 MSANTD3Q96H12 275 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms