RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 DNASE1L2Q92874 299 aa12.13□□□□□ -0.47
SUB1-213ENST00000515355 SECISBP2LQ93073 1101 aaKnown RBP12.13□□□□□ -0.47
SUB1-213ENST00000515355 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
SUB1-213ENST00000515355 ULBP1Q9BZM6 244 aa12.13□□□□□ -0.47
SUB1-213ENST00000515355 PDCL3Q9H2J4 239 aa12.13□□□□□ -0.47
SUB1-213ENST00000515355 LINC00597Q9H2U6 94 aa12.13□□□□□ -0.47
SUB1-213ENST00000515355 NMUR1Q9HB89 426 aa12.13□□□□□ -0.47
SUB1-213ENST00000515355 IL37Q9NZH6 218 aa12.13□□□□□ -0.47
SUB1-213ENST00000515355 AJAP1Q9UKB5 411 aaPredicted RBP12.13□□□□□ -0.47
SUB1-213ENST00000515355 ARHGAP26Q9UNA1 814 aa12.13□□□□□ -0.47
SUB1-213ENST00000515355 SH3BP1Q9Y3L3 701 aa12.13□□□□□ -0.47
SUB1-213ENST00000515355 MTF2Q9Y483 593 aaPredicted RBP12.13□□□□□ -0.47
SUB1-213ENST00000515355 MAN2B1O00754 1011 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 MED7O43513 233 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 ZBED1O96006 694 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 OAS1P00973 400 aaKnown RBP12.12□□□□□ -0.47
SUB1-213ENST00000515355 HMBSP08397 361 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 SETSIPP0DME0 302 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 RALAP11233 206 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 AOC1P19801 751 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 ATP5C1P36542 298 aaKnown RBP12.12□□□□□ -0.47
SUB1-213ENST00000515355 STARD6P59095 220 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 SLC7A9P82251 487 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 ZXDBP98169 803 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 KCNMA1Q12791 1236 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 RUNX3Q13761 415 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 ZNF268Q14587 947 aaPredicted RBP12.12□□□□□ -0.47
SUB1-213ENST00000515355 STILQ15468 1287 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 ZNF77Q15935 545 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 CNGA2Q16280 664 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 ITPRIPL2Q3MIP1 535 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 KLHDC7AQ5VTJ3 777 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 BTBD8Q5XKL5 378 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 DENND1BQ6P3S1 775 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 LCLAT1Q6UWP7 414 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 MIB1Q86YT6 1006 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 PASD1Q8IV76 773 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 MIS12Q9H081 205 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 PNPLA8Q9NP80 782 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 SCUBE2Q9NQ36 999 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 FAM207AQ9NSI2 230 aaPredicted RBP12.12□□□□□ -0.47
SUB1-213ENST00000515355 OSER1Q9NX31 292 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 RASAL2Q9UJF2 1139 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
SUB1-213ENST00000515355 MRPS17Q9Y2R5 130 aaKnown RBP12.12□□□□□ -0.47
SUB1-213ENST00000515355 FHOD1Q9Y613 1164 aa12.12□□□□□ -0.47
SUB1-213ENST00000515355 MYH10P35580 1976 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 SPECC1L-ADORA2AF8WAN1 911 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 FOXN3O00409 490 aaPredicted RBP12.11□□□□□ -0.47
SUB1-213ENST00000515355 NCAM2O15394 837 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 ATP1A3P13637 1013 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 PFKLP17858 780 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 ZNF132P52740 706 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
SUB1-213ENST00000515355 PTK2Q05397 1052 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 EFEMP1Q12805 493 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 DRAP1Q14919 205 aaPredicted RBP12.11□□□□□ -0.47
SUB1-213ENST00000515355 NCAPHQ15003 741 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 PON2Q15165 354 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 PDGFRLQ15198 375 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 SKOR2Q2VWA4 1001 aaPredicted RBP12.11□□□□□ -0.47
SUB1-213ENST00000515355 LCE2DQ5TA82 110 aaPredicted RBP12.11□□□□□ -0.47
SUB1-213ENST00000515355 PMF1Q6P1K2 205 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 TADA2BQ86TJ2 420 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 CPA6Q8N4T0 437 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 PJA1Q8NG27 643 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 OSCP1Q8WVF1 389 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 ZNF606Q8WXB4 792 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 FAM83CQ9BQN1 747 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 UBXN6Q9BZV1 441 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 C8orf33Q9H7E9 229 aaPredicted RBP12.11□□□□□ -0.47
SUB1-213ENST00000515355 LTB4R2Q9NPC1 389 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 NLRC4Q9NPP4 1024 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 HPS4Q9NQG7 708 aa12.11□□□□□ -0.47
SUB1-213ENST00000515355 PTPRDP23468 1912 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 FAM92AA1XBS5 289 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 ARNTLO00327 626 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 ZDHHC11BP0C7U3 371 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 UCHL3P15374 230 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 TARSP26639 723 aaKnown RBP12.1□□□□□ -0.47
SUB1-213ENST00000515355 KRT9P35527 623 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 PLA2G4AP47712 749 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 PSEN1P49768 467 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 POLR2FP61218 127 aaKnown RBP12.1□□□□□ -0.47
SUB1-213ENST00000515355 TPM4P67936 248 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 GOLGA8FQ08AF8 430 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 GOLGA8DPQ0D2H9 430 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 USP4Q13107 963 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 NR1H3Q13133 447 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 SYCP1Q15431 976 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 ZSCAN23Q3MJ62 389 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 TAF3Q5VWG9 929 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 SNX30Q5VWJ9 437 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 CCDC186Q7Z3E2 898 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 SCD5Q86SK9 330 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 DDX42Q86XP3 938 aaKnown RBP eCLIP12.1□□□□□ -0.47
SUB1-213ENST00000515355 DHX40Q8IX18 779 aaKnown RBP12.1□□□□□ -0.47
SUB1-213ENST00000515355 ARHGAP18Q8N392 663 aa12.1□□□□□ -0.47
SUB1-213ENST00000515355 RNF139Q8WU17 664 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms