RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 RUNX3Q13761 415 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
PTCD2-210ENST00000515198 PKDCCQ504Y2 493 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 RAB41Q5JT25 222 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 TADA2BQ86TJ2 420 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 RALGPS2Q86X27 583 aaPredicted RBP13.14□□□□□ -0.31
PTCD2-210ENST00000515198 ARHGAP18Q8N392 663 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 KIAA1958Q8N8K9 716 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 PJA1Q8NG27 643 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 RIN3Q8TB24 985 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 OSCP1Q8WVF1 389 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 KCTD13Q8WZ19 329 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 SHC3Q92529 594 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 ATP2A3Q93084 1043 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 BPIFA3Q9BQP9 254 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 OSBPL6Q9BZF3 934 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 FOXQ1Q9C009 403 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 EBF3Q9H4W6 596 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 CCSER2Q9H7U1 834 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 LTB4R2Q9NPC1 389 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 SIX2Q9NPC8 291 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 CYLDQ9NQC7 956 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 SMPD4Q9NXE4 827 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 GTSE1Q9NYZ3 720 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 NAGPAQ9UK23 515 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 COL4A3Q01955 1670 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 FAM170BA6NMN3 283 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 SLC9A3R1O14745 358 aaPredicted RBP13.13□□□□□ -0.31
PTCD2-210ENST00000515198 THAP12O43422 761 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 ZBED1O96006 694 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 RARGP13631 454 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 CD72P21854 359 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 GNA15P30679 374 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 COPB1P53618 953 aaKnown RBP13.13□□□□□ -0.31
PTCD2-210ENST00000515198 AMPD2Q01433 879 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 PTK2Q05397 1052 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 TNK2Q07912 1038 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 ADIGQ0VDE8 80 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 KCNMA1Q12791 1236 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 NR1H3Q13133 447 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 TRIM68Q6AZZ1 485 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 SIX6OS1Q8N1H7 587 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 CPA6Q8N4T0 437 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 ZNF276Q8N554 614 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 TTC8Q8TAM2 541 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 FAM3CQ92520 227 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 SECISBP2LQ93073 1101 aaKnown RBP13.13□□□□□ -0.31
PTCD2-210ENST00000515198 CDK5RAP1Q96SZ6 601 aaKnown RBP13.13□□□□□ -0.31
PTCD2-210ENST00000515198 ZSWIM1Q9BR11 485 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 LSM14BQ9BX40 385 aaKnown RBP13.13□□□□□ -0.31
PTCD2-210ENST00000515198 NMUR1Q9HB89 426 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 CLIC5Q9NZA1 410 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 CFAP97Q9P2B7 532 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 LIMA1Q9UHB6 759 aaKnown RBP13.13□□□□□ -0.31
PTCD2-210ENST00000515198 SH3BP1Q9Y3L3 701 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
PTCD2-210ENST00000515198 WNT6Q9Y6F9 365 aa13.13□□□□□ -0.31
PTCD2-210ENST00000515198 SYCE3A1L190 88 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 BECN2A8MW95 431 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 SPECC1L-ADORA2AF8WAN1 911 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 TULP2O00295 520 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 CALCAP01258 141 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 TARSP26639 723 aaKnown RBP13.12□□□□□ -0.31
PTCD2-210ENST00000515198 CTHP32929 405 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 MAGEA9P43362 315 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 PGFP49763 221 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 ZNF165P49910 485 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 ZXDBP98169 803 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 RAPGEF1Q13905 1077 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 NCAPHQ15003 741 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 MEA1Q16626 185 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 C10orf120Q5SQS8 335 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 KLHDC7AQ5VTJ3 777 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 PM20D1Q6GTS8 502 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 KLHDC10Q6PID8 442 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 CCDC105Q8IYK2 499 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 SCML4Q8N228 414 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 SLC35F5Q8WV83 523 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 ZNF606Q8WXB4 792 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 EXOC4Q96A65 974 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 PLCB1Q9NQ66 1216 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 HPS4Q9NQG7 708 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 CNGB3Q9NQW8 809 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTCD2-210ENST00000515198 OSER1Q9NX31 292 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 TBC1D14Q9P2M4 693 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 DNMT3LQ9UJW3 386 aa13.12□□□□□ -0.31
PTCD2-210ENST00000515198 NDRG2Q9UN36 371 aaKnown RBP13.12□□□□□ -0.31
PTCD2-210ENST00000515198 ZNF318Q5VUA4 2279 aa13.11□□□□□ -0.31
PTCD2-210ENST00000515198 TRIOO75962 3097 aa13.11□□□□□ -0.31
PTCD2-210ENST00000515198 E2F8A0AVK6 867 aa13.11□□□□□ -0.31
PTCD2-210ENST00000515198 FOXN3O00409 490 aaPredicted RBP13.11□□□□□ -0.31
PTCD2-210ENST00000515198 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
PTCD2-210ENST00000515198 NFATC1O95644 943 aa13.11□□□□□ -0.31
PTCD2-210ENST00000515198 DCNP07585 359 aaKnown RBP13.11□□□□□ -0.31
PTCD2-210ENST00000515198 LCP1P13796 627 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms