RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 MRPL17Q9NRX2 175 aaKnown RBP20.64■□□□□ 0.9
SSBP2-218ENST00000514493 RBM12Q9NTZ6 932 aaKnown RBP20.64■□□□□ 0.9
SSBP2-218ENST00000514493 AFF4Q9UHB7 1163 aaKnown RBP20.64■□□□□ 0.9
SSBP2-218ENST00000514493 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.64■□□□□ 0.9
SSBP2-218ENST00000514493 USP17L7P0C7H9 530 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 CTSAP10619 480 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 HAPLN1P10915 354 aaPredicted RBP20.64■□□□□ 0.89
SSBP2-218ENST00000514493 DNAJB2P25686 324 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 SDC4P31431 198 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 ZNF211Q13398 564 aaPredicted RBP20.64■□□□□ 0.89
SSBP2-218ENST00000514493 SEL1L2Q5TEA6 688 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 PRPF38BQ5VTL8 546 aaKnown RBP20.64■□□□□ 0.89
SSBP2-218ENST00000514493 PM20D1Q6GTS8 502 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 RHOT1Q8IXI2 618 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 NDRG1Q92597 394 aaKnown RBP20.64■□□□□ 0.89
SSBP2-218ENST00000514493 ANKZF1Q9H8Y5 726 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 FNIP2Q9P278 1114 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 LZTS1Q9Y250 596 aa20.64■□□□□ 0.89
SSBP2-218ENST00000514493 LRCH4O75427 683 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 FGGP02679 453 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 BMP8BP34820 402 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 PTPN9P43378 593 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 GPR15P49685 360 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 TAS2R40P59535 323 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 DDR2Q16832 855 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 MGAT5BQ3V5L5 792 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 TPGS2Q68CL5 300 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 CC2D1AQ6P1N0 951 aaPredicted RBP20.63■□□□□ 0.89
SSBP2-218ENST00000514493 AUTS2Q8WXX7 1259 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 CFAP57Q96MR6 1250 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 SLC2A13Q96QE2 648 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 SEPT5Q99719 369 aaPredicted RBP20.63■□□□□ 0.89
SSBP2-218ENST00000514493 EPC1Q9H2F5 836 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 SSX2IPQ9Y2D8 614 aa20.63■□□□□ 0.89
SSBP2-218ENST00000514493 LILRB3O75022 631 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 ABLIM3O94929 683 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 RHOXF2BP0C7M4 288 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 DESP17661 470 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 MATKP42679 507 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 YWHAZP63104 245 aaKnown RBP20.62■□□□□ 0.89
SSBP2-218ENST00000514493 DUSP4Q13115 394 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 CCDC14Q49A88 953 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 LRRC38Q5VT99 294 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 FAM109BQ6ICB4 259 aaPredicted RBP20.62■□□□□ 0.89
SSBP2-218ENST00000514493 ARFGAP1Q8N6T3 406 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 SCAMP5Q8TAC9 235 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 ZNF461Q8TAF7 563 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 RHOXF2Q9BQY4 288 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 C11orf84Q9BUA3 381 aaPredicted RBP20.62■□□□□ 0.89
SSBP2-218ENST00000514493 DDX23Q9BUQ8 820 aaKnown RBP20.62■□□□□ 0.89
SSBP2-218ENST00000514493 POPDC2Q9HBU9 364 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.62■□□□□ 0.892e-6■■■■■ 42.2
SSBP2-218ENST00000514493 HSFX1Q9UBD0 423 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 YJEFN3A6XGL0 299 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 E7ENQ6 273 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 C5orf67F2Z3F1 127 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 RNF8O76064 485 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 LTFP02788 710 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 PYGMP11217 842 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 PCK1P35558 622 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 SSR1P43307 286 aaKnown RBP20.62■□□□□ 0.89
SSBP2-218ENST00000514493 RAB33AQ14088 237 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 C15orf59Q2T9L4 293 aaPredicted RBP20.62■□□□□ 0.89
SSBP2-218ENST00000514493 SDHAF4Q5VUM1 108 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 CCDC70Q6NSX1 233 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 HFE2Q6ZVN8 426 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 NUP93Q8N1F7 819 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 SPATA17Q96L03 361 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 RXFP1Q9HBX9 757 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 SLC27A5Q9Y2P5 690 aa20.62■□□□□ 0.89
SSBP2-218ENST00000514493 MTCL1Q9Y4B5 1905 aaKnown RBP20.61■□□□□ 0.89
SSBP2-218ENST00000514493 ATG2AQ2TAZ0 1938 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 GRXCR1A8MXD5 290 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 CCDC188H7C350 402 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 SOAT2O75908 522 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 ARHGEF15O94989 841 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 MYOGP15173 224 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 TCF4P15884 667 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 RPL10AP62906 217 aaKnown RBP20.61■□□□□ 0.89
SSBP2-218ENST00000514493 SLC25A11Q02978 314 aaKnown RBP20.61■□□□□ 0.89
SSBP2-218ENST00000514493 LONRF2Q1L5Z9 754 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 DEFB106AQ8N104 65 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 CEP295NLQ96MC4 621 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 C17orf80Q9BSJ5 609 aa20.61■□□□□ 0.89
SSBP2-218ENST00000514493 KRIT1O00522 736 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 ATF2P15336 505 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 ATP11AP98196 1134 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 CDO1Q16878 200 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 POLNQ7Z5Q5 900 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 KATNAL2Q8IYT4 538 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 TRIM62Q9BVG3 475 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 FBXO44Q9H4M3 255 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 IL37Q9NZH6 218 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 PCDHA11Q9Y5I1 949 aa20.6■□□□□ 0.89
SSBP2-218ENST00000514493 TARSL2A2RTX5 802 aaKnown RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 TEX28O15482 410 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 FYNP06241 537 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 TUBBP07437 444 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 CA3P07451 260 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 ATF6P18850 670 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms