RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 FAM186AA6NE01 2351 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 K7EQS6 105 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 GREM1O60565 184 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 TLR5O60602 858 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 LRP3O75074 770 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 ADH1CP00326 375 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 RETP07949 1114 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 ADH5P11766 374 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 LPAL2Q16609 132 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 TCERG1LQ5VWI1 586 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 RHBDF2Q6PJF5 856 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 ERMP1Q7Z2K6 904 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 C12orf40Q86WS4 652 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 CAMKK1Q8N5S9 505 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 SLC4A11Q8NBS3 891 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 CCDC26Q8TAB7 109 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 USP33Q8TEY7 942 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 GAB3Q8WWW8 586 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 WBP2Q969T9 261 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 JAKMIP2Q96AA8 810 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 HHIPQ96QV1 700 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 DNAI2Q9GZS0 605 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 PARD6AQ9NPB6 346 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 POLR3BQ9NW08 1133 aaPredicted RBP11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 OSER1Q9NX31 292 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 MAN1B1Q9UKM7 699 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 SH3BP1Q9Y3L3 701 aa11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 RIF1Q5UIP0 2472 aaKnown RBP11.04□□□□□ -0.64
HMGXB3-205ENST00000514469 PSMA7O14818 248 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 ACO1P21399 889 aaKnown RBP11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 BMP6P22004 513 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 PPP1R2P41236 205 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 PXNP49023 591 aaPredicted RBP11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 KIF11P52732 1056 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 RAD23BP54727 409 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 MESP2Q0VG99 397 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 STIM1Q13586 685 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 DMC1Q14565 340 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 ZNF394Q53GI3 561 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 ARHGAP17Q68EM7 881 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 CCDC186Q7Z3E2 898 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 BBS7Q8IWZ6 715 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 PHTF2Q8N3S3 785 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 UBR7Q8N806 425 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 TATDN2Q93075 761 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 TMEM176AQ96HP8 235 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 DHTKD1Q96HY7 919 aaPredicted RBP11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 DUSP16Q9BY84 665 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 NACA2Q9H009 215 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 NMUR1Q9HB89 426 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 DLL3Q9NYJ7 618 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 ARMCX3Q9UH62 379 aaPredicted RBP11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 EBF1Q9UH73 591 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 USP3Q9Y6I4 520 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 CACNA1AO00555 2505 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 SPTBN4Q9H254 2564 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
HMGXB3-205ENST00000514469 A0A1W2PQH9 124 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 HOXC11O43248 304 aaPredicted RBP11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 RPP40O75818 363 aaKnown RBP11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 APBB3O95704 486 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 TBX18O95935 607 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 IRF1P10914 325 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 SLC6A11P48066 632 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 SEC13P55735 322 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 FOXK2Q01167 660 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 LMNB2Q03252 620 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 GAD2Q05329 585 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 SPEM2Q0P670 501 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 CUL2Q13617 745 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 MORC3Q14149 939 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 LY6G5CQ5SRR4 150 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 TTI2Q6NXR4 508 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 KLHDC10Q6PID8 442 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 FOXR2Q6PJQ5 311 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 HTR3DQ70Z44 454 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 CEP68Q76N32 757 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 SCD5Q86SK9 330 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 SFTPA1Q8IWL2 248 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 ETFBKMTQ8IXQ9 262 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 ZNF276Q8N554 614 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 FAM160A2Q8N612 972 aaPredicted RBP11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 HEXIM2Q96MH2 286 aaKnown RBP11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 PNKPQ96T60 521 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 METTL14Q9HCE5 456 aaKnown RBP11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 SPHK2Q9NRA0 654 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 CIZ1Q9ULV3 898 aaPredicted RBP11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 MMP17Q9ULZ9 603 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 USP18Q9UMW8 372 aa11.02□□□□□ -0.65
HMGXB3-205ENST00000514469 A0A0A0MRY4 1105 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 ANTXRLA6NF34 631 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 PRR5-ARHGAP8B1AHC4 643 aa11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.01□□□□□ -0.65
HMGXB3-205ENST00000514469 PPP1R3GB7ZBB8 358 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms