RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 NELL2Q99435 816 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 ZSWIM1Q9BR11 485 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 VPS16Q9H269 839 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 HPS4Q9NQG7 708 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 CFAP97Q9P2B7 532 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.75■□□□□ 0.27
DDX41-214ENST00000512334 USP3Q9Y6I4 520 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 SCAMP3O14828 347 aaKnown RBP16.74■□□□□ 0.27
DDX41-214ENST00000512334 GALR2O43603 387 aaPredicted RBP16.74■□□□□ 0.27
DDX41-214ENST00000512334 LETM1O95202 739 aaPredicted RBP16.74■□□□□ 0.27
DDX41-214ENST00000512334 TBX18O95935 607 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 IRF1P10914 325 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 RARGP13631 454 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 CTHP32929 405 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 NUBP1P53384 320 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 MLLT6P55198 1093 aaPredicted RBP16.74■□□□□ 0.27
DDX41-214ENST00000512334 KRT31Q15323 416 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 ANO6Q4KMQ2 910 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 C1orf228Q6PIY5 440 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 RALGPS2Q86X27 583 aaPredicted RBP16.74■□□□□ 0.27
DDX41-214ENST00000512334 CPA6Q8N4T0 437 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 ANKRD20A12PQ8NF67 263 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 SECISBP2LQ93073 1101 aaKnown RBP16.74■□□□□ 0.27
DDX41-214ENST00000512334 ATP2A3Q93084 1043 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 OSBPL6Q9BZF3 934 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 NAT10Q9H0A0 1025 aaKnown RBP16.74■□□□□ 0.27
DDX41-214ENST00000512334 LINC00597Q9H2U6 94 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 NMUR1Q9HB89 426 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 OSER1Q9NX31 292 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 DNAJC12Q9UKB3 198 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 NUDT5Q9UKK9 219 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 CNTN6Q9UQ52 1028 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 SH3BP1Q9Y3L3 701 aa16.74■□□□□ 0.27
DDX41-214ENST00000512334 SHISA7A6NL88 538 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 THAP12O43422 761 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 MED7O43513 233 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 ZBED1O96006 694 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 RALAP11233 206 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 LCP1P13796 627 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 PTMSP20962 102 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 CDK11BP21127 795 aaKnown RBP16.73■□□□□ 0.27
DDX41-214ENST00000512334 GNA15P30679 374 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 ATP5C1P36542 298 aaKnown RBP16.73■□□□□ 0.27
DDX41-214ENST00000512334 PLA2G4AP47712 749 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 PSEN1P49768 467 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 RGS7P49802 495 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 PTPN5P54829 565 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 ADIGQ0VDE8 80 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 KLHL40Q2TBA0 621 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 EML3Q32P44 896 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 RAB41Q5JT25 222 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 C10orf120Q5SQS8 335 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 TXNDC11Q6PKC3 985 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 SCD5Q86SK9 330 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 TADA2BQ86TJ2 420 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 SIX6OS1Q8N1H7 587 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 ARHGAP18Q8N392 663 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 AOPEPQ8N6M6 819 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 LSM14BQ9BX40 385 aaKnown RBP16.73■□□□□ 0.27
DDX41-214ENST00000512334 ULBP1Q9BZM6 244 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 ECT2Q9H8V3 914 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 SIX2Q9NPC8 291 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 CYLDQ9NQC7 956 aa16.73■□□□□ 0.27
DDX41-214ENST00000512334 ARIH1Q9Y4X5 557 aaPredicted RBP16.73■□□□□ 0.27
DDX41-214ENST00000512334 OTOL1A6NHN0 477 aaPredicted RBP16.72■□□□□ 0.27
DDX41-214ENST00000512334 PIK3R2O00459 728 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 SLC9A3R1O14745 358 aaPredicted RBP16.72■□□□□ 0.27
DDX41-214ENST00000512334 MDM4O15151 490 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 NFATC1O95644 943 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 AMPD2Q01433 879 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 GOLGA8FQ08AF8 430 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 GOLGA8DPQ0D2H9 430 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 KCNMA1Q12791 1236 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 RAPGEF1Q13905 1077 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 PON2Q15165 354 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 PKDCCQ504Y2 493 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 FKBP15Q5T1M5 1219 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 ZFRQ96KR1 1074 aaKnown RBP16.72■□□□□ 0.27
DDX41-214ENST00000512334 ACP6Q9NPH0 428 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX41-214ENST00000512334 DLGAP2Q9P1A6 1054 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 DNMT3LQ9UJW3 386 aa16.72■□□□□ 0.27
DDX41-214ENST00000512334 AJAP1Q9UKB5 411 aaPredicted RBP16.72■□□□□ 0.27
DDX41-214ENST00000512334 BECN2A8MW95 431 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 H0Y858 1186 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 YWHAGP61981 247 aaKnown RBP eCLIP16.71■□□□□ 0.27
DDX41-214ENST00000512334 TCF15Q12870 199 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 NR1H3Q13133 447 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 PMF1Q6P1K2 205 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 RSRC2Q7L4I2 434 aaKnown RBP16.71■□□□□ 0.27
DDX41-214ENST00000512334 SLC35F5Q8WV83 523 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 ZNF606Q8WXB4 792 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 KCTD13Q8WZ19 329 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 SHC3Q92529 594 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 NDRG1Q92597 394 aaKnown RBP16.71■□□□□ 0.27
DDX41-214ENST00000512334 CDK5RAP1Q96SZ6 601 aaKnown RBP16.71■□□□□ 0.27
DDX41-214ENST00000512334 LMAN1LQ9HAT1 526 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 ST7Q9NRC1 585 aa16.71■□□□□ 0.27
DDX41-214ENST00000512334 SPATA6Q9NWH7 488 aaPredicted RBP16.71■□□□□ 0.27
DDX41-214ENST00000512334 CLIC5Q9NZA1 410 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms