RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 C12orf29Q8N999 325 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 SLC2A14Q8TDB8 520 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 MAIP1Q8WWC4 291 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 IRGQQ8WZA9 623 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 GOLGA1Q92805 767 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 TRIM43Q96BQ3 446 aaPredicted RBP9.56□□□□□ -0.88
NR1I3-230ENST00000511944 PAAF1Q9BRP4 392 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 CNPY3Q9BT09 278 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 DPEP3Q9H4B8 488 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 FAM49BQ9NUQ9 324 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 RRN3Q9NYV6 651 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 HSFX1Q9UBD0 423 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 FAN1Q9Y2M0 1017 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 MICAL3Q7RTP6 2002 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 PCNTO95613 3336 aa9.56□□□□□ -0.88
NR1I3-230ENST00000511944 TBKBP1A7MCY6 615 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 ZNF487B1APH4 448 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 E5RJQ4 531 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 CCDC188H7C350 402 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 DYNC1I1O14576 645 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 KCNK3O14649 394 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 DDX3YO15523 660 aaKnown RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 CALCAP01258 141 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 GALTP07902 379 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 PDGFRBP09619 1106 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 COMTP21964 271 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 PTPN7P35236 360 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 CETN2P41208 172 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 PTPN9P43378 593 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 ALDH7A1P49419 539 aaKnown RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 PEX5P50542 639 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 ZNF143P52747 638 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 RWDD2BP57060 319 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 WDR5P61964 334 aaKnown RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 SLC6A3Q01959 620 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 ORC1Q13415 861 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 ELOAQ14241 798 aaKnown RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 MESDQ14696 234 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 HADHQ16836 314 aaKnown RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 TCTN1Q2MV58 587 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 C4orf17Q53FE4 359 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 GLE1Q53GS7 698 aaKnown RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 MDH1BQ5I0G3 518 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 RAB41Q5JT25 222 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 PMF1Q6P1K2 205 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 OLFML1Q6UWY5 402 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 VSTM1Q6UX27 236 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 RSRC2Q7L4I2 434 aaKnown RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 DEFB128Q7Z7B8 93 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 RHOT1Q8IXI2 618 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 KATNAL2Q8IYT4 538 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 RNF168Q8IYW5 571 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 TMEM130Q8N3G9 435 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 RABGGTAQ92696 567 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 MCEEQ96PE7 176 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 RTP3Q9BQQ7 232 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 HTATIP2Q9BUP3 242 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 ZCWPW1Q9H0M4 648 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 MTIF3Q9H2K0 278 aaKnown RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 DMAP1Q9NPF5 467 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 CRTAC1Q9NQ79 661 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 DDX56Q9NY93 547 aaKnown RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 SCHIP1Q9P0W5 487 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-230ENST00000511944 TMEM59LQ9UK28 342 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 MAFFQ9ULX9 164 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 EFR3BQ9Y2G0 817 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 CENPFP49454 3210 aa9.55□□□□□ -0.88
NR1I3-230ENST00000511944 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 CDK2AP1O14519 115 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 B4GALT3O60512 393 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 HSF2BPO75031 334 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 KRT7P08729 469 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 CCDC130P13994 396 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 CSF2RAP15509 400 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 MCM3P25205 808 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
NR1I3-230ENST00000511944 BRCC3P46736 316 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 SLC11A1P49279 550 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 BCAR1P56945 870 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 CREMQ03060 361 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 FPGSQ05932 587 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 FAM102AQ5T9C2 384 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-230ENST00000511944 SEL1L2Q5TEA6 688 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 CCDC70Q6NSX1 233 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 FUT10Q6P4F1 479 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 CLEC20AQ6ZU45 233 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 PAQR9Q6ZVX9 377 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 DNAAF5Q86Y56 855 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 PSTKQ8IV42 348 aaKnown RBP9.54□□□□□ -0.88
NR1I3-230ENST00000511944 MMGT1Q8N4V1 131 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
NR1I3-230ENST00000511944 EXD1Q8NHP7 514 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 UBA3Q8TBC4 463 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 SPPL2BQ8TCT7 592 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 PCED1BQ96HM7 432 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms