RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MFHAS1Q9Y4C4 1052 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 NFIAQ12857 509 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 SLC27A3Q5K4L6 730 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 ASIC4Q96FT7 647 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 TMEM237Q96Q45 408 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 ECDO95905 644 aaPredicted RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 CDK5RAP1Q96SZ6 601 aaKnown RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 KRT84Q9NSB2 600 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 TMED5Q9Y3A6 229 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 A0A087WWV3 80 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 DNAJA2O60884 412 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 ITGA10O75578 1167 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 ZNF846Q147U1 533 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 ERMARDQ5T6L9 678 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 ANKRD13AQ8IZ07 590 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 ELMOD1Q8N336 334 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 NMD3Q96D46 503 aaKnown RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 DCP1AQ9NPI6 582 aaPredicted RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 PPIL2Q13356 520 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 CYB5R4Q7L1T6 521 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 ACMSDQ8TDX5 336 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 TMEM120AQ9BXJ8 343 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 RGS18Q9NS28 235 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 C2CD2Q9Y426 696 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 RGS5O15539 181 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 PDHBP11177 359 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 HIRAP54198 1017 aaPredicted RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 OTUD4Q01804 1114 aaKnown RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 OASLQ15646 514 aaKnown RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 C6orf52Q5T4I8 152 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 RMDN3Q96TC7 470 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 HAO1Q9UJM8 370 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 PRPF19Q9UMS4 504 aaKnown RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 ME2P23368 584 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 RABL6Q3YEC7 729 aaPredicted RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 SPOUT1Q5T280 376 aaKnown RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 GTF3C2Q8WUA4 911 aaPredicted RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 CCDC154A6NI56 674 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 TYSND1Q2T9J0 566 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 OR8H2Q8N162 312 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 NEDD1Q8NHV4 660 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 AIFM3Q96NN9 605 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 CD274Q9NZQ7 290 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 TMEM114B3SHH9 223 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 ZCCHC18P0CG32 403 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 CDK16Q00536 496 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 TTC23Q5W5X9 447 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 NIF3L1Q9GZT8 377 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 PIK3CGP48736 1102 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 TUFMP49411 452 aaKnown RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 SCARA5Q6ZMJ2 495 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 TTC30AQ86WT1 665 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 NEDD4LQ96PU5 975 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 BTBD9Q96Q07 612 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 SNX13Q9Y5W8 968 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 EFCAB10A6NFE3 127 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 PRKAB2O43741 272 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 BAIAP3O94812 1187 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 BNIP2Q12982 314 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SBK1Q52WX2 424 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SZRD1Q7Z422 152 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 OR6Y1Q8NGX8 325 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 TJP2Q9UDY2 1190 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ATPIF1Q9UII2 106 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 TPBGLP0DKB5 382 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 DCAF4L1Q3SXM0 396 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ABRAXAS1Q6UWZ7 409 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 CDC26Q8NHZ8 85 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ELMO2Q96JJ3 720 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 RIT2Q99578 217 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 TMEM47Q9BQJ4 181 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 POLR3FQ9H1D9 316 aaPredicted RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 CLOCKO15516 846 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 PDGFRBP09619 1106 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 CDC25AP30304 524 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SARSP49591 514 aaKnown RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 GEMP55040 296 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MGAT5Q09328 741 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 VPS72Q15906 364 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 KIAA1841Q6NSI8 718 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ZNF302Q9NR11 478 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 UBA6A0AVT1 1052 aaPredicted RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 SLC16A4O15374 487 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 TGDSO95455 350 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 AKT1P31749 480 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MAB21L3Q8N8X9 362 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SNX31Q8N9S9 440 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MDM1Q8TC05 714 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SH3KBP1Q96B97 665 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MKL2Q9ULH7 1088 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SCARA3Q6AZY7 606 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 STX12Q86Y82 276 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 TDRD5Q8NAT2 981 aaKnown RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 OXER1Q8TDS5 423 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ACSBG1Q96GR2 724 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 PAIP1Q9H074 479 aaKnown RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 FETUBQ9UGM5 382 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 RIPK2O43353 540 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ETFBP38117 255 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms