RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 SQORQ9Y6N5 450 aa13.05□□□□□ -0.32
PRDM16-205ENST00000509860 GREB1Q4ZG55 1949 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 NRP1O14786 923 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 HOXD10P28358 340 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 DHX9Q08211 1270 aaKnown RBP13.04□□□□□ -0.32
PRDM16-205ENST00000509860 RAB41Q5JT25 222 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 ATL2Q8NHH9 583 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 NT5C3BQ969T7 300 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 VWCEQ96DN2 955 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRDM16-205ENST00000509860 ADAM21Q9UKJ8 722 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 FKTNO75072 461 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 RPLP2P05387 115 aaKnown RBP13.04□□□□□ -0.32
PRDM16-205ENST00000509860 PLCB3Q01970 1234 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 ADIGQ0VDE8 80 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 BBS12Q6ZW61 710 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 ARCQ7LC44 396 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 SH2D3CQ8N5H7 860 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 CCDC185Q8N715 623 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 NKD2Q969F2 451 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-205ENST00000509860 PAK6Q9NQU5 681 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-205ENST00000509860 HCSTQ9UBK5 93 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 USP3Q9Y6I4 520 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 MICAL3Q7RTP6 2002 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 ARVCFO00192 962 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 CYP11A1P05108 521 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 FAM163BP0C2L3 166 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 NPR3P17342 541 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 RAB27AP51159 221 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 DYNLT1P63172 113 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 DSC1Q08554 894 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 MTFR1Q15390 333 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 FAM171BQ6P995 826 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 TMEM121Q9BTD3 319 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 SEMA4AQ9H3S1 761 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 FAM204AQ9H8W3 233 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 HMX1Q9NP08 348 aaPredicted RBP13.04□□□□□ -0.32
PRDM16-205ENST00000509860 WHRNQ9P202 907 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 ATP8A1Q9Y2Q0 1164 aa13.04□□□□□ -0.32
PRDM16-205ENST00000509860 LTBP2Q14767 1821 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 DCDC2CA8MYV0 355 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 RPL9P32969 192 aaKnown RBP13.03□□□□□ -0.32
PRDM16-205ENST00000509860 ITGA8P53708 1063 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 ARTNQ5T4W7 220 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 PLD5Q8N7P1 536 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 KCTD13Q8WZ19 329 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 FAF2Q96CS3 445 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 GLT1D1Q96MS3 346 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 RUNDC3BQ96NL0 473 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 SNRNP25Q9BV90 132 aaKnown RBP13.03□□□□□ -0.32
PRDM16-205ENST00000509860 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRDM16-205ENST00000509860 CYLDQ9NQC7 956 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 KRT82Q9NSB4 513 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 PTPRSQ13332 1948 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 KRT7P08729 469 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 PTPN9P43378 593 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 VCPP55072 806 aaKnown RBP13.03□□□□□ -0.32
PRDM16-205ENST00000509860 OTUD4Q01804 1114 aaKnown RBP13.03□□□□□ -0.32
PRDM16-205ENST00000509860 GAD2Q05329 585 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 GRIK3Q13003 919 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 BYSLQ13895 437 aaKnown RBP13.03□□□□□ -0.32
PRDM16-205ENST00000509860 ZKSCAN8Q15776 578 aaPredicted RBP13.03□□□□□ -0.32
PRDM16-205ENST00000509860 FAM35AQ86V20 835 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 TBCBQ99426 244 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 PLVAPQ9BX97 442 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 STARD7Q9NQZ5 370 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 ASNSD1Q9NWL6 643 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 EFR3BQ9Y2G0 817 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 MFHAS1Q9Y4C4 1052 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 CST8O60676 142 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 TJP3O95049 919 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 SCNN1AP37088 669 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 MAP3K7CLP57077 242 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 SYPL2Q5VXT5 272 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 HIBCHQ6NVY1 386 aaPredicted RBP13.03□□□□□ -0.32
PRDM16-205ENST00000509860 ZDHHC17Q8IUH5 632 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 ACTL9Q8TC94 416 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 RSPH1Q8WYR4 309 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 DDX23Q9BUQ8 820 aaKnown RBP13.03□□□□□ -0.32
PRDM16-205ENST00000509860 PCDH18Q9HCL0 1135 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 HESX1Q9UBX0 185 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 DNAJB4Q9UDY4 337 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 RASAL2Q9UJF2 1139 aa13.03□□□□□ -0.32
PRDM16-205ENST00000509860 ITGAVP06756 1048 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 PGFP49763 221 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 GATMP50440 423 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 PCDH19Q8TAB3 1148 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 LRRN4Q8WUT4 740 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 TNIP3Q96KP6 325 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 HSFY1Q96LI6 401 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 SLC2A13Q96QE2 648 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 WDR83Q9BRX9 315 aaKnown RBP13.02□□□□□ -0.32
PRDM16-205ENST00000509860 TMBIM4Q9HC24 238 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 CSNK1G1Q9HCP0 422 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 INPP5FQ9Y2H2 1132 aa13.02□□□□□ -0.32
PRDM16-205ENST00000509860 TUSC3Q13454 348 aa13.02□□□□□ -0.33
PRDM16-205ENST00000509860 COLGALT2Q8IYK4 626 aa13.02□□□□□ -0.33
PRDM16-205ENST00000509860 PYROXD2Q8N2H3 581 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms