RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 PPEF2O14830 753 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 OGTO15294 1046 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 EXTL3O43909 919 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 EIF5BO60841 1220 aaKnown RBP9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 SOAT2O75908 522 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 AKAP3O75969 853 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 EPN2O95208 641 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 PRAMEF12O95522 483 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 PIGRP01833 764 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 SCP2P22307 547 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 CDC25CP30307 473 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 GUCY2FP51841 1108 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 PPP2R3AQ06190 1150 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 RAD51AP2Q09MP3 1159 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 SMARCB1Q12824 385 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 GNL2Q13823 731 aaKnown RBP9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 ITPRIPL2Q3MIP1 535 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 ARHGAP15Q53QZ3 475 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 C9orf57Q5W0N0 161 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 CEP68Q76N32 757 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 CACNA2D4Q7Z3S7 1137 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 VN1R5Q7Z5H4 357 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 CD302Q8IX05 232 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 CAMKK1Q8N5S9 505 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 TTC9BQ8N6N2 239 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 OR10T2Q8NGX3 314 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 TTC8Q8TAM2 541 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 GAB3Q8WWW8 586 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 CHFRQ96EP1 664 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 ZSCAN31Q96LW9 406 aaPredicted RBP9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 SLC46A2Q9BY10 475 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 ZCWPW1Q9H0M4 648 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 ARRDC1-AS1Q9H2J1 176 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 CLEC4MQ9H2X3 399 aaPredicted RBP9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 RPF1Q9H9Y2 349 aaKnown RBP9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 GKN1Q9NS71 199 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 THG1LQ9NWX6 298 aaKnown RBP9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 PPP4R2Q9NY27 417 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 LARSQ9P2J5 1176 aaKnown RBP9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 ANGPTL2Q9UKU9 493 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 PCDHGA5Q9Y5G8 931 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 TCHHQ07283 1943 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 OBSL1O75147 1896 aa9.3□□□□□ -0.92
COL4A3BP-206ENST00000508809 LAMA5O15230 3695 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 PI4KAP42356 2102 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 A0A0B4J269 797 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 OTOL1A6NHN0 477 aaPredicted RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 SART1O43290 800 aaKnown RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 ATG13O75143 517 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 PLA2G4BP0C869 781 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 ODC1P11926 461 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 ATF6P18850 670 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 MCM2P49736 904 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 ATP2C1P98194 919 aaPredicted RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 PTPAQ15257 358 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 SF3A2Q15428 464 aaKnown RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 HP1BP3Q5SSJ5 553 aaPredicted RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 N4BP2L1Q5TBK1 243 aaPredicted RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 IL31Q6EBC2 164 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 FSTL4Q6MZW2 842 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 PKN3Q6P5Z2 889 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 Q6ZS46 218 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 TMEM150AQ86TG1 271 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 KBTBD6Q86V97 674 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 LRRTM3Q86VH5 581 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 CMTM8Q8IZV2 173 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 FAM184AQ8NB25 1140 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 C2orf15Q8WU43 125 aaKnown RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 FOXD4L4Q8WXT5 416 aaPredicted RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 CHAMP1Q96JM3 812 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 LSM14BQ9BX40 385 aaKnown RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 CCSER1Q9C0I3 900 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 HPS4Q9NQG7 708 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 RXFP3Q9NSD7 469 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 KCNK4Q9NYG8 393 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 CPSF3Q9UKF6 684 aaKnown RBP9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 DSEQ9UL01 958 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 ODF2LQ9ULJ1 636 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 TBX20Q9UMR3 447 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 DERAQ9Y315 318 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 ANAPC1Q9H1A4 1944 aa9.29□□□□□ -0.92
COL4A3BP-206ENST00000508809 TSC2P49815 1807 aa9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 MYO18AQ92614 2054 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 ASCC3Q8N3C0 2202 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 NPHP3-ACAD11A0A0J9YXS1 232 aa9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 METTL12A8MUP2 240 aa9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 DDX3YO15523 660 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 SLC26A4O43511 780 aa9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 RPP40O75818 363 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 WISP1O95388 367 aa9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 HAPLN1P10915 354 aaPredicted RBP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 ESRRAP11474 423 aaPredicted RBP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 HMGA1P17096 107 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 DDX6P26196 483 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 MATR3P43243 847 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 LIG4P49917 911 aa9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 ZNF131P52739 623 aa9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 CYP4F8P98187 520 aa9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 POU5F1Q01860 360 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-206ENST00000508809 PCDH1Q08174 1060 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms