RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 MSANTD3Q96H12 275 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 NAP1L5Q96NT1 182 aaPredicted RBP9.61□□□□□ -0.87
NUP54-207ENST00000508583 SLC46A2Q9BY10 475 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 TMEM51Q9NW97 253 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 IFNKQ9P0W0 207 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 GMIPQ9P107 970 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 MUTYHQ9UIF7 546 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 DNMT3LQ9UJW3 386 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 NAGPAQ9UK23 515 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 STRIP2Q9ULQ0 834 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 ARHGAP26Q9UNA1 814 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 OBSL1O75147 1896 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 MYO16Q9Y6X6 1858 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 HEPACAM2A8MVW5 462 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 DLL1O00548 723 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 SLC9A3R1O14745 358 aaPredicted RBP9.6□□□□□ -0.87
NUP54-207ENST00000508583 ZNF263O14978 683 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 TEX33O43247 280 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 GFPT2O94808 682 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 OAS1P00973 400 aaKnown RBP9.6□□□□□ -0.87
NUP54-207ENST00000508583 ASGR2P07307 311 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 ATP5C1P36542 298 aaKnown RBP9.6□□□□□ -0.87
NUP54-207ENST00000508583 GPD2P43304 727 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 SLC7A9P82251 487 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 CDR2Q01850 454 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 SIGLEC14Q08ET2 396 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 PDCLQ13371 301 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 TSR1Q2NL82 804 aaKnown RBP9.6□□□□□ -0.87
NUP54-207ENST00000508583 ARHGAP29Q52LW3 1261 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 STXBP5Q5T5C0 1151 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 TANGO2Q6ICL3 276 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 SARM1Q6SZW1 724 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 TOGARAM2Q6ZUX3 1019 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 GPRIN1Q7Z2K8 1008 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 VPS36Q86VN1 386 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 SLC44A3Q8N4M1 653 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 ARL14EPQ8N8R7 260 aaPredicted RBP9.6□□□□□ -0.87
NUP54-207ENST00000508583 EPS8L1Q8TE68 723 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 RNF139Q8WU17 664 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 DNASE1L2Q92874 299 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 FGF14Q92915 247 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 KHSRPQ92945 711 aaKnown RBP eCLIP9.6□□□□□ -0.877e-7■■■□□ 17.1
NUP54-207ENST00000508583 EXOC4Q96A65 974 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 SHDQ96IW2 340 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 ZSWIM3Q96MP5 696 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 KXD1Q9BQD3 176 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 BRD9Q9H8M2 597 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 TRPV5Q9NQA5 729 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 SLC2A4RGQ9NR83 387 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 ABCC13Q9NSE7 274 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 CHORDC1Q9UHD1 332 aaPredicted RBP9.6□□□□□ -0.87
NUP54-207ENST00000508583 AJAP1Q9UKB5 411 aaPredicted RBP9.6□□□□□ -0.87
NUP54-207ENST00000508583 FBXL21Q9UKT6 434 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 BZW2Q9Y6E2 419 aaKnown RBP9.6□□□□□ -0.87
NUP54-207ENST00000508583 ANAPC1Q9H1A4 1944 aa9.6□□□□□ -0.87
NUP54-207ENST00000508583 A0A1W2PQH9 124 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 C2orf78A6NCI8 922 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 PI4K2BG5E9Z4 385 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 EPHB6O15197 1021 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 CHADO15335 359 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 COCHO43405 550 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 OLFM2O95897 454 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 GLI1P08151 1106 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 MBL2P11226 248 aaPredicted RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 RARGP13631 454 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 LCP1P13796 627 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 FCARP24071 287 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 CDH5P33151 784 aaPredicted RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 RPL34P49207 117 aaKnown RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 KPNA1P52294 538 aaPredicted RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 YWHAGP61981 247 aaKnown RBP eCLIP9.59□□□□□ -0.87
NUP54-207ENST00000508583 COG7P83436 770 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 ZXDAP98168 799 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 AMPD2Q01433 879 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 FCHO2Q0JRZ9 810 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 PDGFRLQ15198 375 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 ASIC2Q16515 512 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 C10orf120Q5SQS8 335 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 SFMBT2Q5VUG0 894 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 BTBD8Q5XKL5 378 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 SPECC1LQ69YQ0 1117 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 PMF1Q6P1K2 205 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 DENND1BQ6P3S1 775 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 BEND5Q7L4P6 421 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 TMEM110Q86TL2 294 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 C1orf131Q8NDD1 294 aaKnown RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 ST13P5Q8NFI4 369 aaPredicted RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 CSGALNACT1Q8TDX6 532 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 SYN2Q92777 582 aaPredicted RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 EDAQ92838 391 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 USP13Q92995 863 aaPredicted RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 PPP1R13BQ96KQ4 1090 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 ZSWIM1Q9BR11 485 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 C1QTNF1Q9BXJ1 281 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 ULBP1Q9BZM6 244 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 XPO4Q9C0E2 1151 aaKnown RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.59□□□□□ -0.87
NUP54-207ENST00000508583 TBC1D14Q9P2M4 693 aa9.59□□□□□ -0.87
NUP54-207ENST00000508583 WNT16Q9UBV4 365 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms