RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 BFSP2Q13515 415 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SCARF1Q14162 830 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ZNF568Q3ZCX4 644 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 TTC23Q5W5X9 447 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 MFSD5Q6N075 450 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PACS1Q6VY07 963 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 IKBIPQ70UQ0 350 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 PALB2Q86YC2 1186 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ULK2Q8IYT8 1036 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 SHCBP1Q8NEM2 672 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 RDM1Q8NG50 284 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 USP13Q92995 863 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ORAI2Q96SN7 254 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 OSBPL7Q9BZF2 842 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ZNF518BQ9C0D4 1074 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 POLR3FQ9H1D9 316 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 CPVLQ9H3G5 476 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 VTA1Q9NP79 307 aa7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 CRNNQ9UBG3 495 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-224ENST00000508474 ZNF197O14709 1029 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 CYTH3O43739 400 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM20BO75063 409 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 RPA3P35244 121 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TALDO1P37837 337 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PTGER2P43116 358 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 HK2P52789 917 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TPI1P60174 286 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 NCF4Q15080 339 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIM71Q2Q1W2 868 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PPP1R15BQ5SWA1 713 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ARHGAP17Q68EM7 881 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM45BPQ6NSW5 357 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ILDR1Q86SU0 546 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TMEM139Q8IV31 216 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 C8orf59Q8N0T1 100 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 AMER2Q8N7J2 671 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 DRAXINQ8NBI3 349 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 DIS3LQ8TF46 1054 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 NUDT12Q9BQG2 462 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC25A23Q9BV35 468 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TMEM109Q9BVC6 243 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.54□□□□□ -1.29e-8■□□□□ 10.5
UBE2D3-224ENST00000508474 STOML2Q9UJZ1 356 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC8A2Q9UPR5 921 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ZBTB1Q9Y2K1 713 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 UBA6A0AVT1 1052 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 GSC2O15499 205 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 RBP1P09455 135 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ATP6V1B2P21281 511 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PIK3R1P27986 724 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TKTP29401 623 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PRKCIP41743 596 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 CCT3P49368 545 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 C1DQ13901 141 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PRKG1Q13976 671 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 DDR2Q16832 855 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ARCQ7LC44 396 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 UNC45BQ8IWX7 931 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TCAIMQ8N3R3 496 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SCAIQ8N9R8 606 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 BHLHE22Q8NFJ8 381 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 UGT2B28Q9BY64 529 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 LRRC40Q9H9A6 602 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 AGPAT3Q9NRZ7 376 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TOPORSQ9NS56 1045 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ENOPH1Q9UHY7 261 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 C5orf58C9J3I9 102 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIM13O60858 407 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SGPL1O95470 568 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SEC24AO95486 1093 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 CYP11B1P15538 503 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 XPAP23025 273 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 RXRGP48443 463 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 CASP5P51878 434 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PSMC6P62333 389 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 MRPS22P82650 360 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 GTF2H3Q13889 308 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 MAPRE1Q15691 268 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ANO4Q32M45 955 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 THOC7Q6I9Y2 204 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC22A9Q8IVM8 553 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 EID3Q8N140 333 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SNX31Q8N9S9 440 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ZBTB8BQ8NAP8 495 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 MINDY2Q8NBR6 621 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TADA1Q96BN2 335 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ZNF333Q96JL9 665 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 NSMCE2Q96MF7 247 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 DUSP9Q99956 384 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 UBE2OQ9C0C9 1292 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 VPS45Q9NRW7 570 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC5A4Q9NY91 659 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 H2AFY2Q9P0M6 372 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 FEM1BQ9UK73 627 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 EIF3LQ9Y262 564 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SIK3Q9Y2K2 1263 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 V9GYQ6 96 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SOAT2O75908 522 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 BBOX1O75936 387 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 GDF11O95390 407 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms