RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 NEU1Q99519 415 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 MNTQ99583 582 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 NUDT22Q9BRQ3 303 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 BRD8Q9H0E9 1235 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 GBA2Q9HCG7 927 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 UBN1Q9NPG3 1134 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 EIF2B4Q9UI10 523 aaKnown RBP3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 USP22Q9UPT9 525 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 ARAP3Q8WWN8 1544 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 ITIH6Q6UXX5 1313 aa3.68□□□□□ -1.82
TRAPPC11-205ENST00000506426 LMTK3Q96Q04 1460 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 FER1L4A9Z1Z3 1794 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 PRAMEF33A0A0G2JMD5 474 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 CCDC196A0A1B0GTZ2 297 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 A0A1W2PS29 197 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 MYADML2A6NDP7 307 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 A6NLC8 198 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 H0Y3Z8 333 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 PRAMEF10O60809 474 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 TK1P04183 234 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 FAM163BP0C2L3 166 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 HGFP14210 728 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 RXRAP19793 462 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 KLRK1P26718 216 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 EPHA3P29320 983 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 CD6P30203 668 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 AKT1P31749 480 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 APOBEC3AP31941 199 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 NPTX2P47972 431 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 GATMP50440 423 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 PDE6CP51160 858 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 PGDP52209 483 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 RABGGTBP53611 331 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 PRKAA2P54646 552 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 EIF5P55010 431 aaKnown RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 RPS7P62081 194 aaKnown RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 VAMP2P63027 116 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 MC2RQ01718 297 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 UBE3AQ05086 875 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 SLC12A1Q13621 1099 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 HLXQ14774 488 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 RPS6KA2Q15349 733 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 C1QL3Q5VWW1 255 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 ICE2Q659A1 982 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 RGS7BPQ6MZT1 257 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 NFRKBQ6P4R8 1299 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 MICALCLQ6ZW33 695 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 HTR3DQ70Z44 454 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 RRAGAQ7L523 313 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 TMPRSS9Q7Z410 1059 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 MAPKAPK5Q8IW41 473 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 TMEM57Q8N5G2 664 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 Q8NA96 180 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 MBD3L2Q8NHZ7 208 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 CSGALNACT1Q8TDX6 532 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 CPT1BQ92523 772 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 SNX19Q92543 992 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 HDAC2Q92769 488 aaKnown RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 GOLGA1Q92805 767 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 C3orf49Q96BT1 292 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 COG8Q96MW5 612 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 KCNC2Q96PR1 638 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZSWIM1Q9BR11 485 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 GPR87Q9BY21 358 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 INO80BQ9C086 356 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 TWSG1Q9GZX9 223 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 ELAC1Q9H777 363 aaKnown RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 JMJD4Q9H9V9 463 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 RASSF1Q9NS23 344 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 SMC4Q9NTJ3 1288 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 PPP4R1LQ9P1A2 415 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 FBXO2Q9UK22 296 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 NFU1Q9UMS0 254 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 DAPP1Q9UN19 280 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 C19orf53Q9UNZ5 99 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 PCF11O94913 1555 aaKnown RBP3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 SIGLEC1Q9BZZ2 1709 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 FANCAO15360 1455 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 NEO1Q92859 1461 aa3.67□□□□□ -1.82
TRAPPC11-205ENST00000506426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 ADAMTSL3P82987 1691 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 RIMS1Q86UR5 1692 aaKnown RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 A0A0G2JLL6 359 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 CCDC78A2IDD5 438 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 TISP43B9A030 160 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 E7EVH7 732 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZNF185O15231 689 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 FOXS1O43638 330 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 RPS6KA4O75676 772 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 KRT38O76015 456 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 RECQL4O94761 1208 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 CD4P01730 458 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 CSF1RP07333 972 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 UQCRC1P31930 480 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 CNR2P34972 360 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZEB1P37275 1124 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 RXRGP48443 463 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 MAN2A2P49641 1150 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms