RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 PLCB1Q9NQ66 1216 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 CLIC5Q9NZA1 410 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 NAGPAQ9UK23 515 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 KMT2EQ8IZD2 1858 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 LEFTY2O00292 366 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 SLC9A3R1O14745 358 aaPredicted RBP17.55■□□□□ 0.4
SNCA-209ENST00000506244 ZBED1O96006 694 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 BPIFB4P59827 614 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 AMPD2Q01433 879 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 APBA1Q02410 837 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 PTK2Q05397 1052 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 ADIGQ0VDE8 80 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 RAPGEF1Q13905 1077 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 ITPRIPL2Q3MIP1 535 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 KLHDC7AQ5VTJ3 777 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 KLHDC10Q6PID8 442 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 CPA6Q8N4T0 437 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 PJA1Q8NG27 643 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 UBA3Q8TBC4 463 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 SECISBP2LQ93073 1101 aaKnown RBP17.55■□□□□ 0.4
SNCA-209ENST00000506244 EXOC4Q96A65 974 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 NELL2Q99435 816 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 FUCA2Q9BTY2 467 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 OSBPL6Q9BZF3 934 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 CCSER2Q9H7U1 834 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 CNGB3Q9NQW8 809 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 DUS2Q9NX74 493 aaKnown RBP17.55■□□□□ 0.4
SNCA-209ENST00000506244 SMPD4Q9NXE4 827 aa17.55■□□□□ 0.4
SNCA-209ENST00000506244 A0A1W2PQH9 124 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 NCAM2O15394 837 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 NFATC1O95644 943 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 UCHL3P15374 230 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 AVPR2P30518 371 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 ATP5C1P36542 298 aaKnown RBP17.54■□□□□ 0.4
SNCA-209ENST00000506244 MAGEA9P43362 315 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 KCNMA1Q12791 1236 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 RALGPS2Q86X27 583 aaPredicted RBP17.54■□□□□ 0.4
SNCA-209ENST00000506244 SCML4Q8N228 414 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 ZNF276Q8N554 614 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 SLC35F5Q8WV83 523 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 ZFYVE19Q96K21 471 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 HSFY1Q96LI6 401 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 FAM83CQ9BQN1 747 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 ZSWIM1Q9BR11 485 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 RNF38Q9H0F5 515 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 LTB4R2Q9NPC1 389 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 GKN1Q9NS71 199 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.54■□□□□ 0.4
SNCA-209ENST00000506244 SH3BP1Q9Y3L3 701 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 SIT1Q9Y3P8 196 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 FHOD1Q9Y613 1164 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 ZNF318Q5VUA4 2279 aa17.54■□□□□ 0.4
SNCA-209ENST00000506244 LRRC10BA6NIK2 292 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 TULP2O00295 520 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 SART1O43290 800 aaKnown RBP17.53■□□□□ 0.4
SNCA-209ENST00000506244 FBXO21O94952 628 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 RARGP13631 454 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 ACADSBP45954 432 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 VCPP55072 806 aaKnown RBP17.53■□□□□ 0.4
SNCA-209ENST00000506244 NR1H3Q13133 447 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 RUNX3Q13761 415 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 UBXN2BQ14CS0 331 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 ZSCAN23Q3MJ62 389 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 C10orf120Q5SQS8 335 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 PM20D1Q6GTS8 502 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 RSRC2Q7L4I2 434 aaKnown RBP17.53■□□□□ 0.4
SNCA-209ENST00000506244 DHX40Q8IX18 779 aaKnown RBP17.53■□□□□ 0.4
SNCA-209ENST00000506244 RIN3Q8TB24 985 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 ZNF606Q8WXB4 792 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 GOLGA1Q92805 767 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 OTUB2Q96DC9 234 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 PCMTD1Q96MG8 357 aaPredicted RBP17.53■□□□□ 0.4
SNCA-209ENST00000506244 ULBP1Q9BZM6 244 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 OLA1Q9NTK5 396 aaKnown RBP17.53■□□□□ 0.4
SNCA-209ENST00000506244 CFAP97Q9P2B7 532 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 TBC1D14Q9P2M4 693 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 DNMT3LQ9UJW3 386 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 CEP83Q9Y592 693 aa17.53■□□□□ 0.4
SNCA-209ENST00000506244 E2F8A0AVK6 867 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 SPECC1L-ADORA2AF8WAN1 911 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 COL9A1P20849 921 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 CTHP32929 405 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 YWHAGP61981 247 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNCA-209ENST00000506244 UBXN1Q04323 297 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 TNK2Q07912 1038 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 DRAP1Q14919 205 aaPredicted RBP17.52■□□□□ 0.4
SNCA-209ENST00000506244 FILIP1LQ4L180 1135 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 FAM71AQ8IYT1 594 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 TMEM105Q8N8V8 129 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 NEK11Q8NG66 645 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 STK32AQ8WU08 396 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 IRGQQ8WZA9 623 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 FAM3CQ92520 227 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 NOX5Q96PH1 765 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 TRIM62Q9BVG3 475 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 NAA15Q9BXJ9 866 aaKnown RBP17.52■□□□□ 0.4
SNCA-209ENST00000506244 STK33Q9BYT3 514 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 FOXQ1Q9C009 403 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 HSD3B7Q9H2F3 369 aa17.52■□□□□ 0.4
SNCA-209ENST00000506244 EBF3Q9H4W6 596 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms