RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CCDC113Q9H0I3 377 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 CASS4Q9NQ75 786 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 SEL1LQ9UBV2 794 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 PPM1HQ9ULR3 514 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 TAF6LQ9Y6J9 622 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 CNTNAP5Q8WYK1 1306 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 CACNA1CQ13936 2221 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 TRAV19A0A0A6YYK7 116 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 PRR19A6NJB7 356 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 GFRA2O00451 464 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 YKT6O15498 198 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 GAS7O60861 476 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 VPS4BO75351 444 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 NOL4O94818 638 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 C4BPAP04003 597 aaKnown RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 CKMP06732 381 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 GP1BAP07359 652 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 NFICP08651 508 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 THEGLP0DJG4 465 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 LIPCP11150 499 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 SLC6A4P31645 630 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 RPL9P32969 192 aaKnown RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 MCM4P33991 863 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 TUFMP49411 452 aaKnown RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 ADCY7P51828 1080 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 NXPH1P58417 271 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 PSMC5P62195 406 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 RACK1P63244 317 aaKnown RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 NCBP1Q09161 790 aaKnown RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 KLRB1Q12918 225 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 DMP1Q13316 513 aaPredicted RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 KCNJ12Q14500 433 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 VEPH1Q14D04 833 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 MGAT5BQ3V5L5 792 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 LRCH2Q5VUJ6 765 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 SDHAF4Q5VUM1 108 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 JAKMIP3Q5VZ66 844 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 DIEXFQ68CQ4 756 aaKnown RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 SV2AQ7L0J3 742 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 MIER3Q7Z3K6 550 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 C14orf80Q86SX3 495 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 HEATR4Q86WZ0 1026 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 TMPRSS6Q8IU80 811 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 ZNF654Q8IZM8 581 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 ARL14Q8N4G2 192 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 CCDC82Q8N4S0 544 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 NAT16Q8N8M0 369 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 RBBP8NLQ8NC74 664 aaPredicted RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 TTC16Q8NEE8 873 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 OR4C6Q8NH72 309 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 PANK1Q8TE04 598 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 TCP11Q8WWU5 503 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 HPS3Q969F9 1004 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 GRAMD1AQ96CP6 724 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 TRMT2BQ96GJ1 504 aaKnown RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 ABHD17AQ96GS6 310 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 CEP170P1Q96L14 293 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 MTRQ99707 1265 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 OXCT2Q9BYC2 517 aaPredicted RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 RNF38Q9H0F5 515 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 ZCWPW1Q9H0M4 648 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 GSX1Q9H4S2 264 aaPredicted RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 CNNM2Q9H8M5 875 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 ERVMER34-1Q9H9K5 563 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 CNTN3Q9P232 1028 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 LRWD1Q9UFC0 647 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 TUBGCP4Q9UGJ1 667 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 VPS4AQ9UN37 437 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 PPME1Q9Y570 386 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 NUB1Q9Y5A7 615 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 U3KPZ7 1027 aaPredicted RBP3.62□□□□□ -1.83
TCOF1-208ENST00000506063 MXRA5Q9NR99 2828 aa3.62□□□□□ -1.83
TCOF1-208ENST00000506063 AKAP6Q13023 2319 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 FER1L5A0AVI2 2057 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 A0A1W2PPC4 97 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 SMCO2A6NFE2 343 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TMEM200CA6NKL6 621 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TCP11X1B4DZS4 312 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 ABLIM1O14639 778 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 PPEF2O14830 753 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 IFIT3O14879 490 aaKnown RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 SDC3O75056 442 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 PPP1R37O75864 691 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 DDAH1O94760 285 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 SEMA4FO95754 770 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 ADH1CP00326 375 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 PDGFAP04085 211 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 CENPBP07199 599 aaPredicted RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 CISD3P0C7P0 127 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 CALM1P0DP23 149 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 CALM2P0DP24 149 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 CALM3P0DP25 149 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 RXRAP19793 462 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TYMPP19971 482 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 ACO1P21399 889 aaKnown RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 KRTAP10-9P60411 292 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 SLC7A9P82251 487 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 NAA30Q147X3 362 aaPredicted RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 SAFBQ15424 915 aaKnown RBP eCLIP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms