RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 ZNF77Q15935 545 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 ARHGAP44Q17R89 818 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 CCDC142Q17RM4 750 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 ANO6Q4KMQ2 910 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 RAB41Q5JT25 222 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 MIIPQ5JXC2 388 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 DGKKQ5KSL6 1271 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 C10orf120Q5SQS8 335 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 STXBP5Q5T5C0 1151 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 BTBD8Q5XKL5 378 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 PM20D1Q6GTS8 502 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 PPP1R2P3Q6NXS1 205 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 TPRG1Q6ZUI0 275 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 ARHGEF19Q8IW93 802 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 AOPEPQ8N6M6 819 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 ZMIZ2Q8NF64 920 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 NEK11Q8NG66 645 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 SCAMP5Q8TAC9 235 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 SH3RF2Q8TEC5 729 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 IPO4Q8TEX9 1081 aaKnown RBP8.2□□□□□ -1.1
SKP2-203ENST00000504386 RNF139Q8WU17 664 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 OSCP1Q8WVF1 389 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 FAM3CQ92520 227 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 ELMO3Q96BJ8 720 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 MS4A3Q96HJ5 214 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 SPAG5Q96R06 1193 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 MED15Q96RN5 788 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 FANCLQ9NW38 375 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 TAB2Q9NYJ8 693 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 GMIPQ9P107 970 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 NAGPAQ9UK23 515 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 DNAJC12Q9UKB3 198 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 CPQQ9Y646 472 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 USP3Q9Y6I4 520 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 PIAS3Q9Y6X2 628 aa8.2□□□□□ -1.1
SKP2-203ENST00000504386 BDP1A6H8Y1 2624 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 C2orf78A6NCI8 922 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 HHLA1C9JL84 531 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 LEFTY2O00292 366 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 LRRN2O75325 713 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 BEST1O76090 585 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 LSM8O95777 96 aaKnown RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 ZNF18P17022 549 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 SLC9A1P19634 815 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 AVPR2P30518 371 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 CDR1P51861 262 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 COPB1P53618 953 aaKnown RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 CACNA2D1P54289 1103 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 PTPN5P54829 565 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 YWHAGP61981 247 aaKnown RBP eCLIP8.19□□□□□ -1.1
SKP2-203ENST00000504386 UBXN1Q04323 297 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 PDE4CQ08493 712 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 RUNX3Q13761 415 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 UBXN2BQ14CS0 331 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 SYCP1Q15431 976 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 FBXO43Q4G163 708 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 KLHDC7AQ5VTJ3 777 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 C11orf57Q6ZUT1 292 aaPredicted RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 BEND5Q7L4P6 421 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 ZNF677Q86XU0 584 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 ZDHHC17Q8IUH5 632 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 ZNF557Q8N988 423 aaPredicted RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 PJA1Q8NG27 643 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 SLC35F5Q8WV83 523 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 ZNF606Q8WXB4 792 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 KREMEN1Q96MU8 473 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 ERGIC2Q96RQ1 377 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 FAM83CQ9BQN1 747 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 RPP25Q9BUL9 199 aaKnown RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 DDX23Q9BUQ8 820 aaKnown RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 LSM14BQ9BX40 385 aaKnown RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 STK33Q9BYT3 514 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 IRX2Q9BZI1 471 aaPredicted RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 VPS16Q9H269 839 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 LHX5Q9H2C1 402 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 SYNCQ9H7C4 482 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 LTB4R2Q9NPC1 389 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 C11orf16Q9NQ32 467 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 GKN1Q9NS71 199 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 ABCC13Q9NSE7 274 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 TMEM30AQ9NV96 361 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 CHORDC1Q9UHD1 332 aaPredicted RBP8.19□□□□□ -1.1
SKP2-203ENST00000504386 PCDHGC3Q9UN70 934 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 NOTCH4Q99466 2003 aa8.19□□□□□ -1.1
SKP2-203ENST00000504386 TECTAO75443 2155 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 NUP210Q8TEM1 1887 aaPredicted RBP8.18□□□□□ -1.1
SKP2-203ENST00000504386 SYCE3A1L190 88 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 KRBA1A5PL33 1030 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 FAM170BA6NMN3 283 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 SPECC1L-ADORA2AF8WAN1 911 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 CYP26A1O43174 497 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 COCHO43405 550 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 ATG13O75143 517 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 LATS1O95835 1130 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 SERPINC1P01008 464 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 CYBBP04839 570 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 GLI1P08151 1106 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 RARGP13631 454 aa8.18□□□□□ -1.1
SKP2-203ENST00000504386 DESP17661 470 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms