RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MYO3BQ8WXR4 1341 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 SORBS3O60504 671 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF202O95125 648 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 RAG1P15918 1043 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 AMPD1P23109 780 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 OMPP47874 163 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 FNTBP49356 437 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 MFAP3P55082 362 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 SLC39A6Q13433 755 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF267Q14586 743 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 XKR9Q5GH70 373 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 FAM26DQ5JW98 314 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 TPRA1Q86W33 373 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 VSTM4Q8IW00 320 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 DTX3Q8N9I9 347 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 NAXEQ8NCW5 288 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ACSBG1Q96GR2 724 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 SEC16BQ96JE7 1060 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 SECISBP2Q96T21 854 aaKnown RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 USP44Q9H0E7 712 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 FNIP2Q9P278 1114 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF223Q9UK11 482 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 STAP1Q9ULZ2 295 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 POLR3HQ9Y535 204 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 DEPDC5O75140 1603 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 UBN2Q6ZU65 1347 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 KIF28PB7ZC32 967 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 CIDEAO60543 219 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 GSNP06396 782 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 PSMC2P35998 433 aaKnown RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 GARSP41250 739 aaKnown RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF618Q5T7W0 954 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 TOM1L2Q6ZVM7 507 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 METTL23Q86XA0 190 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 OR8H3Q8N146 312 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 TANKQ92844 425 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 CYFIP2Q96F07 1278 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 EYA1Q99502 592 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 CCDC8Q9H0W5 538 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 EPB41L1Q9H4G0 881 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 STRN4Q9NRL3 753 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 GRHL1Q9NZI5 618 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 CEP72Q9P209 647 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 HESX1Q9UBX0 185 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ASTN2O75129 1339 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 CDK13Q14004 1512 aaKnown RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 C12orf71A8MTZ7 269 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 H7C2Y5 167 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 DYNC1LI2O43237 492 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 DTNBO60941 627 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 PLEKHA8P1O95397 391 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 APOC1P02654 83 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 GZMAP12544 262 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 RAC2P15153 192 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 CPEP16870 476 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 TATP17735 454 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 CHRNA3P32297 505 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ACTR3P61158 418 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 MYBPC1Q00872 1141 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ZNF423Q2M1K9 1284 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 EDRF1Q3B7T1 1238 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 MSANTD2Q6P1R3 559 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 GALNT18Q6P9A2 607 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 CCDC137Q6PK04 289 aaKnown RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ANKS3Q6ZW76 656 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 PRPF39Q86UA1 669 aaKnown RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 TMC8Q8IU68 726 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 MOSPD2Q8NHP6 518 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 GDPD5Q8WTR4 605 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 NAT14Q8WUY8 206 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 C1orf74Q96LT6 269 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 NSMCE2Q96MF7 247 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 CNOT10Q9H9A5 744 aaKnown RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 PSMC3IPQ9P2W1 217 aaPredicted RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 MAD2L2Q9UI95 211 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 NUP50Q9UKX7 468 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ABCG2Q9UNQ0 655 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 EXOGQ9Y2C4 368 aaKnown RBP6.45□□□□□ -1.38
CLCN3-204ENST00000504131 PCDHGA10Q9Y5H3 936 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 ARHGEF5Q12774 1597 aa6.45□□□□□ -1.38
CLCN3-204ENST00000504131 A0A0J9YVX5 310 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 HEATR9A2RTY3 570 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 KPNA7A9QM74 516 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 FTCDO95954 541 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PF4V1P10720 104 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PDCP20941 246 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 GCH1P30793 250 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 CPT1AP50416 773 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 TPTEP56180 551 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ACY1Q03154 408 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 BTG3Q14201 252 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SEC23BQ15437 767 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 ABCB5Q2M3G0 1257 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 C6orf10Q5SRN2 563 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 YTHDF3Q7Z739 585 aaKnown RBP6.44□□□□□ -1.38
CLCN3-204ENST00000504131 SFR1Q86XK3 245 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 TPH2Q8IWU9 490 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 AHI1Q8N157 1196 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 PYROXD1Q8WU10 500 aa6.44□□□□□ -1.38
CLCN3-204ENST00000504131 HSPBAP1Q96EW2 488 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms