RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 FUBP3Q96I24 572 aaKnown RBP eCLIP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 ZNF558Q96NG5 402 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 SLITRK1Q96PX8 696 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 PNKPQ96T60 521 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 YME1L1Q96TA2 773 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 TBCBQ99426 244 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 NPY6RQ99463 290 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 CLSTN3Q9BQT9 956 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 DDX23Q9BUQ8 820 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 HERC2P3Q9BVR0 1158 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 AP1M1Q9BXS5 423 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 LRRC4Q9HBW1 653 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 PNPLA8Q9NP80 782 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 CNGB3Q9NQW8 809 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 ASNSD1Q9NWL6 643 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 LCMT1Q9UIC8 334 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 BACE2Q9Y5Z0 518 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 CDY1Q9Y6F8 540 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 MTCL1Q9Y4B5 1905 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 BHMG1C9JSJ3 638 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 PI4K2BG5E9Z4 385 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 LILRB3O75022 631 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 HSF2BPO75031 334 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 FBXO21O94952 628 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 SEC24AO95486 1093 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 TRUB2O95900 331 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 ZBED1O96006 694 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 KRT1P04264 644 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 CD48P09326 243 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 RARAP10276 462 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 CPB1P15086 417 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 ATF6P18850 670 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 SDC4P31431 198 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 PCK1P35558 622 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 MATKP42679 507 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 CDKN2BP42772 138 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 MAGEA11P43364 429 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC5A3P53794 718 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 ARPP19P56211 112 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 YWHAZP63104 245 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 ATP11AP98196 1134 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 PSMD5Q16401 504 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 NFE2Q16621 373 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 CA9Q16790 459 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 DDR2Q16832 855 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 CDO1Q16878 200 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 SMTNL2Q2TAL5 461 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 USP41Q3LFD5 358 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 KCNT1Q5JUK3 1230 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 EFHC1Q5JVL4 640 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 C9orf50Q5SZB4 431 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 COL13A1Q5TAT6 717 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 TTC27Q6P3X3 843 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 MFSD7Q6UXD7 560 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 C4orf50Q6ZRC1 276 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 ANKS3Q6ZW76 656 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 POLNQ7Z5Q5 900 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 ADAT2Q7Z6V5 191 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 SCD5Q86SK9 330 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 DDX53Q86TM3 631 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC13A5Q86YT5 568 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 DEFB106AQ8N104 65 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 SIX6OS1Q8N1H7 587 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 PRELID2Q8N945 189 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 FBXO22Q8NEZ5 403 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 EXD1Q8NHP7 514 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 GPR152Q8TDT2 470 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 FAM172AQ8WUF8 416 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 HDAC7Q8WUI4 952 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 UBE2Q2Q8WVN8 375 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 AUTS2Q8WXX7 1259 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 GOLGA1Q92805 767 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 RNF25Q96BH1 459 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 ABHD8Q96I13 439 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 C8orf48Q96LL4 319 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 MAGEB5Q9BZ81 275 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 ZWILCHQ9H900 591 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 NMUR1Q9HB89 426 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 ANLNQ9NQW6 1124 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 GPATCH2LQ9NWQ4 482 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 OSER1Q9NX31 292 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 SPG21Q9NZD8 308 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 IL37Q9NZH6 218 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 RNF14Q9UBS8 474 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 PRKAG2Q9UGJ0 569 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 PCSK1NQ9UHG2 260 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 USP18Q9UMW8 372 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 NAALADL1Q9UQQ1 740 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 R3HDM2Q9Y2K5 976 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC27A5Q9Y2P5 690 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 PCDHB5Q9Y5E4 795 aa7.22□□□□□ -1.25
TOPBP1-203ENST00000503464 hCG_1818297A0A087WSY0 165 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM92AA1XBS5 289 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 H7C4K7 107 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 KRIT1O00522 736 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 C2CD2LO14523 706 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 FSCN2O14926 492 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 FGF18O76093 207 aa7.21□□□□□ -1.26
TOPBP1-203ENST00000503464 ENDOD1O94919 500 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms