RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 SYKP43405 635 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 IFNAR2P48551 515 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 FXR2P51116 673 aaKnown RBP eCLIP5.49□□□□□ -1.535e-7■■■■□ 23.2
HTT-202ENST00000502820 IRAK1P51617 712 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 VSNL1P62760 191 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 KRT83P78385 493 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 MBTD1Q05BQ5 628 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 ZNF33AQ06730 810 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 ACTN3Q08043 901 aaPredicted RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 ADCY2Q08462 1091 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 PRPF4BQ13523 1007 aaKnown RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 RIPK1Q13546 671 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CAPSQ13938 189 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 MXD4Q14582 209 aaPredicted RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 SLC39A14Q15043 492 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 PCBP1Q15365 356 aaKnown RBP eCLIP5.49□□□□□ -1.53
HTT-202ENST00000502820 SAFBQ15424 915 aaKnown RBP eCLIP5.49□□□□□ -1.53
HTT-202ENST00000502820 SNCBQ16143 134 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CRY1Q16526 586 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 AMHR2Q16671 573 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 MGAT5BQ3V5L5 792 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CCDC40Q4G0X9 1142 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 COLEC12Q5KU26 742 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 TTC38Q5R3I4 469 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 ARHGAP40Q5TG30 622 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 PAPD7Q5XG87 772 aaKnown RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 SLC8B1Q6J4K2 584 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 ZNF280DQ6N043 979 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 DHRS13Q6UX07 377 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 KDM7AQ6ZMT4 941 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 TMPRSS7Q7RTY8 843 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 DNAJB7Q7Z6W7 309 aaPredicted RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 CATSPER3Q86XQ3 398 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CD302Q8IX05 232 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CCDC170Q8IYT3 715 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 GALNT15Q8N3T1 639 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CPA6Q8N4T0 437 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 MREGQ8N565 214 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 ALLCQ8N6M5 410 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 PDCD7Q8N8D1 485 aaKnown RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 IGSF22Q8N9C0 903 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 TXNDC5Q8NBS9 432 aaKnown RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 LRRN4CLQ8ND94 238 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 C3orf58Q8NDZ4 430 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 ASAP3Q8TDY4 903 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 PIGOQ8TEQ8 1089 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 BAP1Q92560 729 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CAVIN3Q969G5 261 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 ITFG2Q969R8 447 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CCDC47Q96A33 483 aaKnown RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 SGSM3Q96HU1 749 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CNOT6LQ96LI5 555 aaKnown RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 USP28Q96RU2 1077 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 OSBPL9Q96SU4 736 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 LPIN3Q9BQK8 851 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 FAM117AQ9C073 453 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 SEMA4CQ9C0C4 833 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 TASP1Q9H6P5 420 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 TUFT1Q9NNX1 390 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 HPS4Q9NQG7 708 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 DUS2Q9NX74 493 aaKnown RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 KCNK4Q9NYG8 393 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 CPSF2Q9P2I0 782 aaKnown RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 AFF4Q9UHB7 1163 aaKnown RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 PILRBQ9UKJ0 227 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 MAGED2Q9UNF1 606 aaPredicted RBP5.49□□□□□ -1.53
HTT-202ENST00000502820 CCL26Q9Y258 94 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 WNT6Q9Y6F9 365 aa5.49□□□□□ -1.53
HTT-202ENST00000502820 DOCK8Q8NF50 2099 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 TEX51A0A1B0GUA7 166 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 CFAP73A6NFT4 308 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 UPK3BL1B0FP48 263 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 HMGB1P1B2RPK0 211 aaPredicted RBP5.48□□□□□ -1.53
HTT-202ENST00000502820 UPK3BL2E5RIL1 263 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 KRT86O43790 486 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 USO1O60763 962 aaKnown RBP5.48□□□□□ -1.53
HTT-202ENST00000502820 HSF2BPO75031 334 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 RASSF9O75901 435 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 FAM107AO95990 144 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 SETSIPP0DME0 302 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 GNSP15586 552 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 PFKFB1P16118 471 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 MUTP22033 750 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 GLRA2P23416 452 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 WEE1P30291 646 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 P2RY2P41231 377 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 IL12RB1P42701 662 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 WASP42768 502 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 CCT5P48643 541 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 FNTAP49354 379 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 LIG3P49916 1009 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 TOB1P50616 345 aaPredicted RBP5.48□□□□□ -1.53
HTT-202ENST00000502820 NDUFA8P51970 172 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 YARSP54577 528 aaKnown RBP5.48□□□□□ -1.53
HTT-202ENST00000502820 YWHAHQ04917 246 aaPredicted RBP5.48□□□□□ -1.53
HTT-202ENST00000502820 NFATC3Q12968 1075 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 NR1H3Q13133 447 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 BYSLQ13895 437 aaKnown RBP5.48□□□□□ -1.53
HTT-202ENST00000502820 VEPH1Q14D04 833 aa5.48□□□□□ -1.53
HTT-202ENST00000502820 ZNF174Q15697 407 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms