RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	GLI1	P08151	1106 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	ATF6	P18850	670 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	DNAJB2	P25686	324 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	GRIK1	P39086	918 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	MLLT3	P42568	568 aa	Predicted RBP	12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	NAP1L1	P55209	391 aa	Known RBP	12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	DUSP4	Q13115	394 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	TAF5	Q15542	800 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	RAB30	Q15771	203 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	DDR2	Q16832	855 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	LILRA6	Q6PI73	481 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	DAAM2	Q86T65	1068 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	IRGQ	Q8WZA9	623 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	HES6	Q96HZ4	224 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	KLHL5	Q96PQ7	755 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	SLC2A13	Q96QE2	648 aa		12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	NAPG	Q99747	312 aa	Predicted RBP	12.75	□□□□□ -0.37
MATR3-231	ENST00000502394	C2orf71	A6NGG8	1288 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	DDX3Y	O15523	660 aa	Known RBP	12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	SART1	O43290	800 aa	Known RBP	12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	DAB1	O75553	588 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	SOAT2	O75908	522 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	CXCL14	O95715	111 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	ZBED1	O96006	694 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	C1R	P00736	705 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	FYN	P06241	537 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	COMT	P21964	271 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	CASQ1	P31415	396 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	SLC1A1	P43005	524 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	ZNF143	P52747	638 aa	Predicted RBP	12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	RPL10A	P62906	217 aa	Known RBP	12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	MESD	Q14696	234 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	EFHC1	Q5JVL4	640 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	SDHAF4	Q5VUM1	108 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	DCUN1D2	Q6PH85	259 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	HFE2	Q6ZVN8	426 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	BEND5	Q7L4P6	421 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	TMC7	Q7Z402	723 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	BNIPL	Q7Z465	357 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	SCN4B	Q8IWT1	228 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	TCEAL8	Q8IYN2	117 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	TDH	Q8IZJ6	230 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	NUP93	Q8N1F7	819 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	SIX6OS1	Q8N1H7	587 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	ARFGAP1	Q8N6T3	406 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	EMC1	Q8N766	993 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	MRPL43	Q8N983	215 aa	Known RBP	12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	KIF18A	Q8NI77	898 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	SCAMP5	Q8TAC9	235 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	RXFP2	Q8WXD0	754 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	NDRG1	Q92597	394 aa	Known RBP	12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	NT5C3B	Q969T7	300 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	TCF25	Q9BQ70	676 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	DDX23	Q9BUQ8	820 aa	Known RBP	12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	TTLL2	Q9BWV7	592 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	NKX2-4	Q9H2Z4	354 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	NGRN	Q9NPE2	291 aa	Known RBP	12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	TLR9	Q9NR96	1032 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	COMMD8	Q9NX08	183 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	IP6K2	Q9UHH9	426 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	RABGEF1	Q9UJ41	708 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	SLC27A5	Q9Y2P5	690 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	PLXNA3	P51805	1871 aa		12.74	□□□□□ -0.37
MATR3-231	ENST00000502394	GREB1	Q4ZG55	1949 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	CTAGE9	A4FU28	777 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	YJEFN3	A6XGL0	299 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	HIDE1	A8MVS5	230 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394		E7ENQ6	273 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	ENC1	O14682	589 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	NCK2	O43639	380 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	HSF2BP	O75031	334 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	GRAP2	O75791	330 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	USP17L7	P0C7H9	530 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	GPD1	P21695	349 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	CTNNA2	P26232	953 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	IRS1	P35568	1242 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	PTPN9	P43378	593 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	TUFM	P49411	452 aa	Known RBP	12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	USP46	P62068	366 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	PIGH	Q14442	188 aa	Predicted RBP	12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	SMC1A	Q14683	1233 aa	Known RBP	12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	ACAP1	Q15027	740 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	MGAT5B	Q3V5L5	792 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	CCDC14	Q49A88	953 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	OTUD1	Q5VV17	481 aa	Predicted RBP	12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	PEX26	Q7Z412	305 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	CENPI	Q92674	756 aa	Predicted RBP	12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	CNPY3	Q9BT09	278 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	MSRA	Q9UJ68	235 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	FBXW11	Q9UKB1	542 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	AMFR	Q9UKV5	643 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	SCML2	Q9UQR0	700 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	HYOU1	Q9Y4L1	999 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	YIPF1	Q9Y548	306 aa		12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	RANBP2	P49792	3224 aa	Known RBP	12.73	□□□□□ -0.37
MATR3-231	ENST00000502394	TMEM110-MUSTN1	A8MSY1	372 aa		12.72	□□□□□ -0.37
MATR3-231	ENST00000502394	TGM5	O43548	720 aa		12.72	□□□□□ -0.37
MATR3-231	ENST00000502394	ENDOD1	O94919	500 aa		12.72	□□□□□ -0.37
MATR3-231	ENST00000502394	RTN3	O95197	1032 aa	Predicted RBP	12.72	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms