RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 BNC2Q6ZN30 1099 aaPredicted RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ARPINQ7Z6K5 226 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ZNF605Q86T29 641 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 GRPEL2Q8TAA5 225 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 DNAJC1Q96KC8 554 aaKnown RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 RBM15Q96T37 977 aaKnown RBP eCLIP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 PCDH18Q9HCL0 1135 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 RGS14O43566 566 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ZNF682O95780 498 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ADARP55265 1226 aaKnown RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 TRPV1Q8NER1 839 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 C18orf8Q96DM3 657 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ZBTB10Q96DT7 871 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 IL1RL2Q9HB29 575 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 M0QYV0 167 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 PTPN7P35236 360 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 SLC22A9Q8IVM8 553 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 SCUBE1Q8IWY4 988 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 TMEM168Q9H0V1 697 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 TBC1D22BQ9NU19 505 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 PRKAG3Q9UGI9 489 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 RAP1GAPP47736 663 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 RPS8P62241 208 aaKnown RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 SGO1Q5FBB7 561 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 DDI2Q5TDH0 399 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ERO1BQ86YB8 467 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 CRLS1Q9UJA2 301 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 TSR3Q9UJK0 312 aaKnown RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ACSL4O60488 711 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 FAM20BO75063 409 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 BMP3P12645 472 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 PRG2P13727 222 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ACTR3P61158 418 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ZNF513Q8N8E2 541 aaPredicted RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 OR7A2PQ8NGA2 310 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 PROX1Q92786 737 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 XKR8Q9H6D3 395 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 RAB6BQ9NRW1 208 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 RAB23Q9ULC3 237 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 MYRFQ9Y2G1 1151 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 LRCH1Q9Y2L9 728 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 SNX13Q9Y5W8 968 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ACADSBP45954 432 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 PSMC5P62195 406 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 PTK7Q13308 1070 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 FAM47AQ5JRC9 791 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 KBTBD8Q8NFY9 601 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 RCOR1Q9UKL0 485 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 SNX7Q9UNH6 387 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 DYRK1BQ9Y463 629 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 KDM5DQ9BY66 1539 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 PGRMC2O15173 223 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 CPB1P15086 417 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 CYP27A1Q02318 531 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 LRRC69Q6ZNQ3 347 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 UNC13DQ70J99 1090 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 E2F7Q96AV8 911 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 REPS1Q96D71 796 aa11.52□□□□□ -0.56
AC055713.1-201ENST00000498967 RGS12O14924 1447 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 EPN2O95208 641 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 IFNA6P05013 189 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 TOP3AQ13472 1001 aaPredicted RBP11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 SEL1L3Q68CR1 1132 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 PLA2G4FQ68DD2 849 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 ZDHHC13Q8IUH4 622 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 DAW1Q8N136 415 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 TEX13BQ9BXU2 312 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 SH3GLB2Q9NR46 395 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 ABCA1O95477 2261 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 IRGMA1A4Y4 181 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 LOC110117498-PIK3R3F6TDL0 507 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 CHRNGP07510 517 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 RBP3P10745 1247 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 OMPP47874 163 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 HARS2P49590 506 aaKnown RBP11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 DNAJC3Q13217 504 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 IL18R1Q13478 541 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 GRB14Q14449 540 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 CHERPQ8IWX8 916 aaKnown RBP11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 PIK3R3Q92569 461 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 SH3BP1Q9Y3L3 701 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 DDHD2O94830 711 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 ATP5F1P24539 256 aaPredicted RBP11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 GRIK1P39086 918 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 COA7Q96BR5 231 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 ZNF222Q9UK12 451 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 SCAF8Q9UPN6 1271 aaKnown RBP11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 KDM5AP29375 1690 aaKnown RBP11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 PHF2O75151 1096 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 FAM200BP0CF97 657 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 IL12AP29459 219 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 DSG3P32926 999 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 CCNG1P51959 295 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 HUNKP57058 714 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 MTA1Q13330 715 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 TCEA2Q15560 299 aa11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 CCSAPQ6IQ19 270 aaPredicted RBP11.52□□□□□ -0.57
AC055713.1-201ENST00000498967 KCNV1Q6PIU1 500 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms