RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 A0A1W2PQH9 124 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 LRRC53A6NM62 1247 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 HEPACAM2A8MVW5 462 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 DPYSL4O14531 572 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 FBXO21O94952 628 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 LCP1P13796 627 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 SLC7A9P82251 487 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 CDR2Q01850 454 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 PDCLQ13371 301 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 VITQ6UXI7 678 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 BHLHA9Q7RTU4 235 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 IRF2BP2Q7Z5L9 587 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 GPIHBP1Q8IV16 184 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 PASD1Q8IV76 773 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 MFSD6LQ8IWD5 586 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 UBALD2Q8IYN6 164 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 TMEM35BQ8NCS4 154 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 DEPDC1BQ8WUY9 529 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 IRGQQ8WZA9 623 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 KHSRPQ92945 711 aaKnown RBP eCLIP16.35■□□□□ 0.21
CPNE1-228ENST00000498814 NOX5Q96PH1 765 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 SMG9Q9H0W8 520 aaKnown RBP16.35■□□□□ 0.21
CPNE1-228ENST00000498814 PDCL3Q9H2J4 239 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 CCSER2Q9H7U1 834 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 ST7Q9NRC1 585 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.35■□□□□ 0.21
CPNE1-228ENST00000498814 OSER1Q9NX31 292 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 NAGPAQ9UK23 515 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 ARHGAP26Q9UNA1 814 aa16.35■□□□□ 0.21
CPNE1-228ENST00000498814 TRIOO75962 3097 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 COCHO43405 550 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 DCXO43602 365 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 TLR5O60602 858 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 LSM8O95777 96 aaKnown RBP16.34■□□□□ 0.21
CPNE1-228ENST00000498814 MMEP08473 750 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 RARGP13631 454 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 ALADP13716 330 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 TCF3P15923 654 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 CHRNB2P17787 502 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 PSMC3P17980 439 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 DAOAP59103 153 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 YWHAGP61981 247 aaKnown RBP eCLIP16.34■□□□□ 0.21
CPNE1-228ENST00000498814 ARID5AQ03989 594 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 TAF3Q5VWG9 929 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 KLHDC10Q6PID8 442 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 SCUBE3Q8IX30 993 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 C1orf131Q8NDD1 294 aaKnown RBP16.34■□□□□ 0.21
CPNE1-228ENST00000498814 SLC20A1Q8WUM9 679 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 NDRG1Q92597 394 aaKnown RBP16.34■□□□□ 0.21
CPNE1-228ENST00000498814 PPP1R13BQ96KQ4 1090 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 LRRC3BQ96PB8 259 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 CDK5RAP1Q96SZ6 601 aaKnown RBP16.34■□□□□ 0.21
CPNE1-228ENST00000498814 AIPL1Q9NZN9 384 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 DUSP12Q9UNI6 340 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 CCL26Q9Y258 94 aa16.34■□□□□ 0.21
CPNE1-228ENST00000498814 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.34■□□□□ 0.21
CPNE1-228ENST00000498814 YJEFN3A6XGL0 299 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 E5RJQ4 531 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 E7ENQ6 273 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 PI4K2BG5E9Z4 385 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 PIK3R2O00459 728 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 SART1O43290 800 aaKnown RBP16.33■□□□□ 0.2
CPNE1-228ENST00000498814 AP5Z1O43299 807 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 RALAP11233 206 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 SRFP11831 508 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 ATP5C1P36542 298 aaKnown RBP16.33■□□□□ 0.2
CPNE1-228ENST00000498814 SNX16P57768 344 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 ZXDAP98168 799 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 FMO1Q01740 532 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 FCHO2Q0JRZ9 810 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 SFMBT2Q5VUG0 894 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 SPECC1LQ69YQ0 1117 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 TRIM72Q6ZMU5 477 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 TADA2BQ86TJ2 420 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 VSTM4Q8IW00 320 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 ZNF397Q8NF99 534 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-228ENST00000498814 BPIFB1Q8TDL5 484 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 CPXM1Q96SM3 734 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 TRMT61BQ9BVS5 477 aaKnown RBP16.33■□□□□ 0.2
CPNE1-228ENST00000498814 NUCKS1Q9H1E3 243 aaKnown RBP16.33■□□□□ 0.2
CPNE1-228ENST00000498814 SLC2A4RGQ9NR83 387 aa16.33■□□□□ 0.2
CPNE1-228ENST00000498814 PAPSS1O43252 624 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-228ENST00000498814 NARSO43776 548 aaKnown RBP16.32■□□□□ 0.2
CPNE1-228ENST00000498814 CYP1A1P04798 512 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-228ENST00000498814 GYPCP04921 128 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 MBL2P11226 248 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-228ENST00000498814 PRKCIP41743 596 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 NOMO3P69849 1222 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 GPC5P78333 572 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 ZBED6P86452 979 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 USP4Q13107 963 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 ZNF77Q15935 545 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 ASIC2Q16515 512 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 BSPRYQ5W0U4 402 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 BTBD8Q5XKL5 378 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 KIAA1958Q8N8K9 716 aa16.32■□□□□ 0.2
CPNE1-228ENST00000498814 SH3RF2Q8TEC5 729 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms