RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 CAPN8A6NHC0 703 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 OTOL1A6NHN0 477 aaPredicted RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CCDC169A6NNP5 214 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 H3BRJ5 948 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 ACKR2O00590 384 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 PRRG1O14668 218 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 SLC28A2O43868 658 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CFIP05156 583 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CES1P23141 567 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 ITPKAP23677 461 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 U2AF2P26368 475 aaKnown RBP eCLIP6.02□□□□□ -1.451e-6■■□□□ 13.8
SPTA1-209ENST00000498708 CSRP3P50461 194 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CDR1P51861 262 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 ATXN3P54252 364 aaPredicted RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 ROR1Q01973 937 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 SOX4Q06945 474 aaPredicted RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 GRSF1Q12849 480 aaKnown RBP eCLIP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 ELAVL2Q12926 359 aaKnown RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 HNRNPDQ14103 355 aaKnown RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 LY6DQ14210 128 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 DMC1Q14565 340 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 NAB2Q15742 525 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 ECM1Q16610 540 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 SEZ6Q53EL9 994 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 USP39Q53GS9 565 aaKnown RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 STXBP5Q5T5C0 1151 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CYP4A22Q5TCH4 519 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 NT5DC1Q5TFE4 455 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 ATF7IP2Q5U623 682 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CDCA2Q69YH5 1023 aaPredicted RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 ANKRD34AQ69YU3 496 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CD300LGQ6UXG3 332 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 SYT13Q7L8C5 426 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 GPR155Q7Z3F1 870 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 FAM177A1Q8N128 213 aaPredicted RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 C3orf58Q8NDZ4 430 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 NSUN7Q8NE18 718 aaKnown RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 MCPH1Q8NEM0 835 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 SHKBP1Q8TBC3 707 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 EZH1Q92800 747 aaPredicted RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 GTF3C6Q969F1 213 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 IFT74Q96LB3 600 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 FNBP1Q96RU3 617 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 NFKBIZQ9BYH8 718 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 TRIM4Q9C037 500 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 C2orf40Q9H1Z8 148 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CYP4F11Q9HBI6 524 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 OSGEPQ9NPF4 335 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 TMEM63CQ9P1W3 806 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CEP72Q9P209 647 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 MTRRQ9UBK8 725 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 PILRBQ9UKJ0 227 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 APOBEC2Q9Y235 224 aaKnown RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 CSMD1Q96PZ7 3565 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 BOD1L1Q8NFC6 3051 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 SPENQ96T58 3664 aaKnown RBP6.02□□□□□ -1.45
SPTA1-209ENST00000498708 NUP210Q8TEM1 1887 aaPredicted RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 KNTC1P50748 2209 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 SMIM28A0A1B0GU29 152 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 E9PMD0 336 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 PODXLO00592 558 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 TRDMT1O14717 391 aaKnown RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 SART1O43290 800 aaKnown RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 CBFA2T3O75081 653 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 GJB3O75712 270 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ABLIM3O94929 683 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 OR52Z1P0C646 297 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 XRCC6P12956 609 aaKnown RBP eCLIP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 CYP11B2P19099 503 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 GRIK1P39086 918 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 CCT6AP40227 531 aaKnown RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 NAMPTP43490 491 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ARL4DP49703 201 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 GALK1P51570 392 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 NEK4P51957 841 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 YARSP54577 528 aaKnown RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 PEX3P56589 373 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 SPAG1Q07617 926 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 GNL2Q13823 731 aaKnown RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ANKRD1Q15327 319 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ZRSR1Q15695 479 aaKnown RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 FAM187BQ17R55 369 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ITPRIPL2Q3MIP1 535 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 DCAF4L1Q3SXM0 396 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ZNF568Q3ZCX4 644 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ARHGAP29Q52LW3 1261 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 TAF1BQ53T94 588 aaPredicted RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ANO7Q6IWH7 933 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 C11orf74Q86VG3 221 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ARID3BQ8IVW6 561 aaPredicted RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 NAXDQ8IW45 347 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 CCDC83Q8IWF9 413 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ARMC10Q8N2F6 343 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 DEFB119Q8N690 84 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 ERMNQ8TAM6 284 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 RLN3Q8WXF3 142 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 E2F7Q96AV8 911 aa6.01□□□□□ -1.45
SPTA1-209ENST00000498708 C18orf25Q96B23 403 aaPredicted RBP6.01□□□□□ -1.45
SPTA1-209ENST00000498708 KLHDC7BQ96G42 594 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms