RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 BCKDHBP21953 392 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 CASP1P29466 404 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 P2RY2P41231 377 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 DPP6P42658 865 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 TUBP50607 506 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 IRX4P78413 519 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 EHHADHQ08426 723 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 LMAN2Q12907 356 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 SGSM1Q2NKQ1 1148 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 ANO4Q32M45 955 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 SPDYCQ5MJ68 293 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 EMC10Q5UCC4 262 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
CNOT4-211ENST00000498534 SNX30Q5VWJ9 437 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 TRMT11Q7Z4G4 463 aaKnown RBP12.75□□□□□ -0.37
CNOT4-211ENST00000498534 NAT16Q8N8M0 369 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 SCAMP5Q8TAC9 235 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 OLIG1Q8TAK6 271 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 PARD3BQ8TEW8 1205 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
CNOT4-211ENST00000498534 NUSAP1Q9BXS6 441 aaKnown RBP12.75□□□□□ -0.37
CNOT4-211ENST00000498534 FBXO44Q9H4M3 255 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 SMYD3Q9H7B4 428 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 IL37Q9NZH6 218 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 CFAP45Q9UL16 551 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 MYO16Q9Y6X6 1858 aa12.75□□□□□ -0.37
CNOT4-211ENST00000498534 MYOFQ9NZM1 2061 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 NUP205Q92621 2012 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 ANTXRLA6NF34 631 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 TNFRSF10BO14763 440 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 AP1G2O75843 785 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
CNOT4-211ENST00000498534 RPN1P04843 607 aaKnown RBP12.74□□□□□ -0.37
CNOT4-211ENST00000498534 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
CNOT4-211ENST00000498534 CEACAM1P13688 526 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 KIR2DL1P43626 348 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-211ENST00000498534 CASP4P49662 377 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 SLC5A3P53794 718 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 CLDN10P78369 228 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 KDSRQ06136 332 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 CUL4BQ13620 913 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 UAP1L1Q3KQV9 507 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 FOXD4L6Q3SYB3 417 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-211ENST00000498534 SH3PXD2AQ5TCZ1 1133 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 ATL3Q6DD88 541 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 SDE2Q6IQ49 451 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 FOXD4L3Q6VB84 417 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-211ENST00000498534 PAQR9Q6ZVX9 377 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 ACOT1Q86TX2 421 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 FAM35AQ86V20 835 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 SYT12Q8IV01 421 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 SFTPA1Q8IWL2 248 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 HMGB4Q8WW32 186 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 RLN3Q8WXF3 142 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 TAF4BQ92750 862 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 GZF1Q9H116 711 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-211ENST00000498534 CCSER2Q9H7U1 834 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 TLR8Q9NR97 1041 aaKnown RBP12.74□□□□□ -0.37
CNOT4-211ENST00000498534 SPHK2Q9NRA0 654 aa12.74□□□□□ -0.37
CNOT4-211ENST00000498534 GON4LQ3T8J9 2241 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 USP24Q9UPU5 2620 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 TCRBV21S2A2A0A5A6 115 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 LRRIQ3A6PVS8 624 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-211ENST00000498534 PATE3B3GLJ2 98 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 HOXC11O43248 304 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-211ENST00000498534 TULP3O75386 442 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 ZSCAN22P10073 491 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-211ENST00000498534 HNRNPLP14866 589 aaKnown RBP eCLIP12.73□□□□□ -0.371e-5■■■□□ 17.9
CNOT4-211ENST00000498534 CSRP1P21291 193 aaKnown RBP12.73□□□□□ -0.37
CNOT4-211ENST00000498534 GOLGA8FQ08AF8 430 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 GOLGA8DPQ0D2H9 430 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 MESP2Q0VG99 397 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 TRIM61Q5EBN2 209 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 RESP18Q5W5W9 173 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 SCARA5Q6ZMJ2 495 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 UNC93AQ86WB7 457 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 C12orf40Q86WS4 652 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 TMEM25Q86YD3 366 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 BBS7Q8IWZ6 715 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 TMEFF1Q8IYR6 380 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 FUKQ8N0W3 1084 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 CRYBG2Q8N1P7 616 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 ZNF513Q8N8E2 541 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-211ENST00000498534 ZFRQ96KR1 1074 aaKnown RBP12.73□□□□□ -0.37
CNOT4-211ENST00000498534 DUSP9Q99956 384 aaKnown RBP12.73□□□□□ -0.37
CNOT4-211ENST00000498534 DNAI2Q9GZS0 605 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 KRT82Q9NSB4 513 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 EXOC1Q9NV70 894 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 GMIPQ9P107 970 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 WDR35Q9P2L0 1181 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 EVLQ9UI08 416 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-211ENST00000498534 PCDHA7Q9UN72 937 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 KIAA1549LQ6ZVL6 1849 aa12.73□□□□□ -0.37
CNOT4-211ENST00000498534 MYO18AQ92614 2054 aaKnown RBP12.73□□□□□ -0.37
CNOT4-211ENST00000498534 FAM92AA1XBS5 289 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 CDX4O14627 284 aaPredicted RBP12.72□□□□□ -0.37
CNOT4-211ENST00000498534 GIPC1O14908 333 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 IKBKBO14920 756 aa12.72□□□□□ -0.37
CNOT4-211ENST00000498534 TLR5O60602 858 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms