RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 RCOR3Q9P2K3 495 aaPredicted RBP8.83□□□□□ -1
SF3A1-210ENST00000498259 CACNG4Q9UBN1 327 aa8.83□□□□□ -1
SF3A1-210ENST00000498259 PCYOX1Q9UHG3 505 aa8.83□□□□□ -1
SF3A1-210ENST00000498259 RAB21Q9UL25 225 aa8.83□□□□□ -1
SF3A1-210ENST00000498259 NME7Q9Y5B8 376 aa8.83□□□□□ -1
SF3A1-210ENST00000498259 CENPFP49454 3210 aa8.83□□□□□ -1
SF3A1-210ENST00000498259 DNAH12Q6ZR08 3092 aa8.83□□□□□ -1
SF3A1-210ENST00000498259 TTC3P53804 2025 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 PIK3R2O00459 728 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 LPXNO60711 386 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 ECEL1O95672 775 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 RALAP11233 206 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 NCAM1P13591 858 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 TNFRSF8P28908 595 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 ELF1P32519 619 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 ACTN2P35609 894 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 GJC1P36383 396 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 ARL4AP40617 200 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 PPP3CCP48454 512 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 SULT1E1P49888 294 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 KPNA1P52294 538 aaPredicted RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 DAOAP59103 153 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 TAS2R40P59535 323 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 ATP11AP98196 1134 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 SLC25A11Q02978 314 aaKnown RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 DEUP1Q05D60 604 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 PLD1Q13393 1074 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 VEPH1Q14D04 833 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 PSMD5Q16401 504 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 TAF12Q16514 161 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 CYP1B1Q16678 543 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 DCAF12L1Q5VU92 463 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 KIAA0319Q5VV43 1072 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 SLC8B1Q6J4K2 584 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 DRICH1Q6PGQ1 229 aaPredicted RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 CCDC137Q6PK04 289 aaKnown RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 SPOCD1Q6ZMY3 1216 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 ZNF365Q70YC5 407 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 UBE2Q1Q7Z7E8 422 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 DDX53Q86TM3 631 aaKnown RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 SCN4BQ8IWT1 228 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 CCDC89Q8N998 374 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 C12orf50Q8NA57 414 aaPredicted RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 NOA1Q8NC60 698 aaKnown RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 PDZD8Q8NEN9 1154 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 FBXO22Q8NEZ5 403 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 PIK3R5Q8WYR1 880 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 ANKRD7Q92527 254 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 SLCO2A1Q92959 643 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 RNF25Q96BH1 459 aaPredicted RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 PGAP3Q96FM1 320 aaPredicted RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 CFAP57Q96MR6 1250 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 SLITRK1Q96PX8 696 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 SLC2A13Q96QE2 648 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 KCNK16Q96T55 309 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 RAD9AQ99638 391 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 LRRC1Q9BTT6 524 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 AP1M1Q9BXS5 423 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 CALN1Q9BXU9 219 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 GPR62Q9BZJ7 368 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 ULBP1Q9BZM6 244 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 TRIM7Q9C029 511 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 CWH43Q9H720 699 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 MRPL17Q9NRX2 175 aaKnown RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 FAM114A2Q9NRY5 505 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 MARCH5Q9NX47 278 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 MTRRQ9UBK8 725 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.82□□□□□ -1
SF3A1-210ENST00000498259 PCSK1NQ9UHG2 260 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 SLC12A6Q9UHW9 1150 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 USP3Q9Y6I4 520 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 SLC4A7Q9Y6M7 1214 aa8.82□□□□□ -1
SF3A1-210ENST00000498259 V9GYY5 206 aaPredicted RBP8.82□□□□□ -1
SF3A1-210ENST00000498259 M0QYT0 321 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 TULP2O00295 520 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 HCRTO43612 131 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 GRAP2O75791 330 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 ENDOD1O94919 500 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 HEXIM1O94992 359 aaKnown RBP8.81□□□□□ -1
SF3A1-210ENST00000498259 GJB5O95377 273 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 GJB6O95452 261 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 USP17L7P0C7H9 530 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 RARAP10276 462 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 EN2P19622 333 aaPredicted RBP8.81□□□□□ -1
SF3A1-210ENST00000498259 KDELR1P24390 212 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 CYP2F1P24903 491 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 HTR7P34969 479 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 FLT3P36888 993 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 ALDH1A3P47895 512 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 NR2C2P49116 596 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 DRG2P55039 364 aaKnown RBP8.81□□□□□ -1
SF3A1-210ENST00000498259 CDH6P55285 790 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 ARPP19P56211 112 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 OGDHQ02218 1023 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 DSG1Q02413 1049 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 CAV1Q03135 178 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 ADCY1Q08828 1119 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 ZNF252P-AS1Q0IIN9 211 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 CALCOCO2Q13137 446 aa8.81□□□□□ -1
SF3A1-210ENST00000498259 PPP1R7Q15435 360 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms