RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 ZNF165P49910 485 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 CLCN5P51795 746 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 KIF11P52732 1056 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 NCAPHQ15003 741 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 MLF2Q15773 248 aaPredicted RBP12.08□□□□□ -0.48
HLA-B-254ENST00000497377 SLC44A4Q53GD3 710 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 HECTD3Q5T447 861 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 CC2D1AQ6P1N0 951 aaPredicted RBP12.08□□□□□ -0.48
HLA-B-254ENST00000497377 C1orf228Q6PIY5 440 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 CCDC186Q7Z3E2 898 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 TTC30AQ86WT1 665 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 DDX42Q86XP3 938 aaKnown RBP eCLIP12.08□□□□□ -0.48
HLA-B-254ENST00000497377 ARHGAP18Q8N392 663 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 AOPEPQ8N6M6 819 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
HLA-B-254ENST00000497377 SHC3Q92529 594 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 RSPRY1Q96DX4 576 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 FUCA2Q9BTY2 467 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 VPS16Q9H269 839 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 SIX2Q9NPC8 291 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 PLCB1Q9NQ66 1216 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 GMIPQ9P107 970 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.08□□□□□ -0.48
HLA-B-254ENST00000497377 USP3Q9Y6I4 520 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 KRBA1A5PL33 1030 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 LGALS16A8MUM7 142 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 ARNTLO00327 626 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 BRD2P25440 801 aaKnown RBP12.07□□□□□ -0.48
HLA-B-254ENST00000497377 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
HLA-B-254ENST00000497377 STARD6P59095 220 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 PDE4CQ08493 712 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 KCNMA1Q12791 1236 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 USP4Q13107 963 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 ARHGAP44Q17R89 818 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 PKDCCQ504Y2 493 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 RAB41Q5JT25 222 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 GJB7Q6PEY0 223 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 GPRIN1Q7Z2K8 1008 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 TADA2BQ86TJ2 420 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 PIGZQ86VD9 579 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 ZNF276Q8N554 614 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 CSGALNACT1Q8TDX6 532 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 KCTD13Q8WZ19 329 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 TFAP2BQ92481 460 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
HLA-B-254ENST00000497377 LRRC3BQ96PB8 259 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 SLC22A12Q96S37 553 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 CYP2S1Q96SQ9 504 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 CDK5RAP1Q96SZ6 601 aaKnown RBP12.07□□□□□ -0.48
HLA-B-254ENST00000497377 SMG9Q9H0W8 520 aaKnown RBP12.07□□□□□ -0.48
HLA-B-254ENST00000497377 C8orf33Q9H7E9 229 aaPredicted RBP12.07□□□□□ -0.48
HLA-B-254ENST00000497377 LRRC4Q9HBW1 653 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 CYLDQ9NQC7 956 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 CHORDC1Q9UHD1 332 aaPredicted RBP12.07□□□□□ -0.48
HLA-B-254ENST00000497377 DNAJC12Q9UKB3 198 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 CA14Q9ULX7 337 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 CCL26Q9Y258 94 aa12.07□□□□□ -0.48
HLA-B-254ENST00000497377 TICRRQ7Z2Z1 1910 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 SYCE3A1L190 88 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 BECN2A8MW95 431 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 M0QYV0 167 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 MAN2B1O00754 1011 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 COCHO43405 550 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 TLR5O60602 858 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 GNA15P30679 374 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 BPIFB4P59827 614 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 PTK2Q05397 1052 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 MTF1Q14872 753 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 PDGFRLQ15198 375 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 ZNF77Q15935 545 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 KLHDC7AQ5VTJ3 777 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 PM20D1Q6GTS8 502 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 KLHDC10Q6PID8 442 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 GPIHBP1Q8IV16 184 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 SCML4Q8N228 414 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 UBA3Q8TBC4 463 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 SH3RF2Q8TEC5 729 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 SLC35F5Q8WV83 523 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 HSFY1Q96LI6 401 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 NELL2Q99435 816 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 DDX23Q9BUQ8 820 aaKnown RBP12.06□□□□□ -0.48
HLA-B-254ENST00000497377 LSM14BQ9BX40 385 aaKnown RBP12.06□□□□□ -0.48
HLA-B-254ENST00000497377 OSBPL6Q9BZF3 934 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 RNF38Q9H0F5 515 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 KCNH6Q9H252 994 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 TBC1D17Q9HA65 648 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 CLIC5Q9NZA1 410 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 MRPS17Q9Y2R5 130 aaKnown RBP12.06□□□□□ -0.48
HLA-B-254ENST00000497377 ZDBF2Q9HCK1 2354 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 COL4A2P08572 1712 aa12.06□□□□□ -0.48
HLA-B-254ENST00000497377 SLC9A3R1O14745 358 aaPredicted RBP12.05□□□□□ -0.48
HLA-B-254ENST00000497377 CYP26A1O43174 497 aa12.05□□□□□ -0.48
HLA-B-254ENST00000497377 THAP12O43422 761 aa12.05□□□□□ -0.48
HLA-B-254ENST00000497377 ZBED1O96006 694 aa12.05□□□□□ -0.48
HLA-B-254ENST00000497377 PDGFBP01127 241 aaPredicted RBP12.05□□□□□ -0.48
HLA-B-254ENST00000497377 MBL2P11226 248 aaPredicted RBP12.05□□□□□ -0.48
HLA-B-254ENST00000497377 RALAP11233 206 aa12.05□□□□□ -0.48
HLA-B-254ENST00000497377 UCHL3P15374 230 aa12.05□□□□□ -0.48
HLA-B-254ENST00000497377 ATP5C1P36542 298 aaKnown RBP12.05□□□□□ -0.48
HLA-B-254ENST00000497377 USP8P40818 1118 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms