RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 DHPSP49366 369 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 SLC5A3P53794 718 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 CACNA2D1P54289 1103 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 TMEM92Q6UXU6 159 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 HTR3DQ70Z44 454 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 CEP57L1Q8IYX8 460 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 TMC2Q8TDI7 906 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 ZFRQ96KR1 1074 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 MED10Q9BTT4 135 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 NACA2Q9H009 215 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 GZF1Q9H116 711 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 CSNK1G1Q9HCP0 422 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 TLR8Q9NR97 1041 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 SPHK2Q9NRA0 654 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 DMAC2Q9NW81 257 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 BCCIPQ9P287 314 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 WDR35Q9P2L0 1181 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 CHORDC1Q9UHD1 332 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 USP25Q9UHP3 1055 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 MYOFQ9NZM1 2061 aa17.84■□□□□ 0.45
TRAPPC3-207ENST00000497251 UPK3BL1B0FP48 263 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 UPK3BL2E5RIL1 263 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 SGK1O00141 431 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 CLDN5O00501 218 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 CDX4O14627 284 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 AP5Z1O43299 807 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 KIF20AO95235 890 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 PROS1P07225 676 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 SLFN14P0C7P3 912 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 IRX4P78413 519 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 E2F5Q15329 346 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 PEAR1Q5VY43 1037 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 RESP18Q5W5W9 173 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 KLHDC10Q6PID8 442 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 PHTF2Q8N3S3 785 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 PIGKQ92643 395 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 KCNK16Q96T55 309 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 PNPLA8Q9NP80 782 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 SLC39A2Q9NP94 309 aa17.83■□□□□ 0.44
TRAPPC3-207ENST00000497251 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.83■□□□□ 0.442e-12■■■■■ 298.1
TRAPPC3-207ENST00000497251 TMEM8BA6NDV4 472 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 PDXKO00764 312 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 MAPK13O15264 365 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 ZNF217O75362 1048 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 AP1G2O75843 785 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 BCKDHBP21953 392 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 ME1P48163 572 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 ENPEPQ07075 957 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 MAP7D1Q3KQU3 841 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 ZACNQ401N2 412 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 SH3PXD2AQ5TCZ1 1133 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 SDE2Q6IQ49 451 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 SLC23A3Q6PIS1 610 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 PAQR9Q6ZVX9 377 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 TADA2BQ86TJ2 420 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 FUKQ8N0W3 1084 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 ZNF276Q8N554 614 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 ZNF513Q8N8E2 541 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 TERB1Q8NA31 727 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 SCAMP5Q8TAC9 235 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 XPO6Q96QU8 1125 aaKnown RBP17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 SLC32A1Q9H598 525 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 CYLDQ9NQC7 956 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 INVSQ9Y283 1065 aa17.82■□□□□ 0.44
TRAPPC3-207ENST00000497251 CACNA1EQ15878 2313 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 LRRIQ3A6PVS8 624 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 TLR5O60602 858 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 ADAM23O75077 832 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 TULP3O75386 442 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 NTSR1P30989 418 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 ATP5C1P36542 298 aaKnown RBP17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 IFRD2Q12894 506 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 TRIM61Q5EBN2 209 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 LYSMD4Q5XG99 296 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 C12orf40Q86WS4 652 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 TTC30AQ86WT1 665 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 PGBD3Q8N328 593 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 BLZF1Q9H2G9 400 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 SMYD3Q9H7B4 428 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 KRT82Q9NSB4 513 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 EXOC1Q9NV70 894 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 MARK1Q9P0L2 795 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 LSM7Q9UK45 103 aaKnown RBP17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 PCDHA7Q9UN72 937 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 SCML2Q9UQR0 700 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 FRMD4BQ9Y2L6 1034 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 PCDHA5Q9Y5H7 936 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 CACNA1GO43497 2377 aa17.81■□□□□ 0.44
TRAPPC3-207ENST00000497251 PLXND1Q9Y4D7 1925 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 TCRBV21S2A2A0A5A6 115 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 GFRA2O00451 464 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 NPC1O15118 1278 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 CACNG3O60359 315 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 CLSTN1O94985 981 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 ZSCAN22P10073 491 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 HNRNPLP14866 589 aaKnown RBP eCLIP17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 PSEN1P49768 467 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 ZNF132P52740 706 aa17.8■□□□□ 0.44
TRAPPC3-207ENST00000497251 CDH8P55286 799 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms