RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ACTR5Q9H9F9 607 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 SENP1Q9P0U3 644 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 PSMC3IPQ9P2W1 217 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 FETUBQ9UGM5 382 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 IPPQ9Y573 584 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 CFAP69A5D8W1 941 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 H7C0C1 242 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 SPTLC1O15269 473 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 GNL1P36915 607 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-220ENST00000496711 RGS2P41220 211 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 ATP5OP48047 213 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 RPL34P49207 117 aaKnown RBP13.6□□□□□ -0.23
GARNL3-220ENST00000496711 HDAC4P56524 1084 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 HUNKP57058 714 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 GPX6P59796 221 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 MSS51Q4VC12 460 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 EFHC2Q5JST6 749 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 SLC9A4Q6AI14 798 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 C1orf228Q6PIY5 440 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 ARCQ7LC44 396 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 RASAL3Q86YV0 1011 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 PDIK1LQ8N165 341 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 TAB3Q8N5C8 712 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-220ENST00000496711 PLD5Q8N7P1 536 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 FBXO36Q8NEA4 188 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 GDAP1Q8TB36 358 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 SGSM3Q96HU1 749 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 APBA2Q99767 749 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 GOLGA2P5Q9HBQ8 144 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 MLXIPLQ9NP71 852 aa13.6□□□□□ -0.23
GARNL3-220ENST00000496711 ZNF638Q14966 1978 aaKnown RBP13.6□□□□□ -0.23
GARNL3-220ENST00000496711 TCRBV7S3A2A0A539 114 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 FAM47DPA6NHR8 397 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 TCP11X1B4DZS4 312 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 PDGFRBP09619 1106 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 GNAT1P11488 350 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 TSHRP16473 764 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 KRT15P19012 456 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 CYP2B6P20813 491 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 IL4RP24394 825 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 HOXC8P31273 242 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 ACADSBP45954 432 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 BCAR1P56945 870 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 SOX4Q06945 474 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 CA9Q16790 459 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 KLHL38Q2WGJ6 581 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 LIMS2Q7Z4I7 341 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 ADGRF2Q8IZF7 708 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 NME8Q8N427 588 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 PQLC3Q8N755 202 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 CLEC4CQ8WTT0 213 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 FAF2Q96CS3 445 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 ELAC2Q9BQ52 826 aaKnown RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 WDR83Q9BRX9 315 aaKnown RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 C11orf84Q9BUA3 381 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 OSBPL7Q9BZF2 842 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 TRABDQ9H4I3 376 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 ZMYND8Q9ULU4 1186 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 CAPN7Q9Y6W3 813 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 SCN10AQ9Y5Y9 1956 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 TSC2P49815 1807 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 MANSC4A6NHS7 340 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 PRPF4O43172 522 aaKnown RBP eCLIP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 HUS1O60921 280 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 CAPN15O75808 1086 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 ZBED1O96006 694 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 LCP1P13796 627 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 LMO2P25791 158 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 NRLP54845 237 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 GEMIN4P57678 1058 aaKnown RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 ACTN3Q08043 901 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 ADCY1Q08828 1119 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 KCNJ11Q14654 390 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 PKN2Q16513 984 aaKnown RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 FSCN1Q16658 493 aaKnown RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 BBS9Q3SYG4 887 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 ZNF618Q5T7W0 954 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 SMG8Q8ND04 991 aaKnown RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 PCDH19Q8TAB3 1148 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 SLC2A14Q8TDB8 520 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 SOCS4Q8WXH5 440 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 CCT6BQ92526 530 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 RTP4Q96DX8 246 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 TNIP3Q96KP6 325 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 MAGEB18Q96M61 343 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 ACSS3Q9H6R3 686 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 RRAGCQ9HB90 399 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 PAK5Q9P286 719 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 RABGEF1Q9UJ41 708 aa13.59□□□□□ -0.23
GARNL3-220ENST00000496711 SMG5Q9UPR3 1016 aaKnown RBP13.59□□□□□ -0.23
GARNL3-220ENST00000496711 CHADO15335 359 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 KCNN4O15554 427 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 OAS1P00973 400 aaKnown RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 ATP2A2P16615 1042 aaKnown RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 TFE3P19532 575 aaPredicted RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 SSTR1P30872 391 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 SLC18A1P54219 525 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms