RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 SLC4A11Q8NBS3 891 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 SLC35C1Q96A29 364 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 DHTKD1Q96HY7 919 aaPredicted RBP13.08□□□□□ -0.32
CLDN12-213ENST00000496677 TSG101Q99816 390 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 ARID3AQ99856 593 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 DUSP16Q9BY84 665 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 FAM124BQ9H5Z6 455 aaPredicted RBP13.08□□□□□ -0.32
CLDN12-213ENST00000496677 CYLDQ9NQC7 956 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 CISHQ9NSE2 258 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 USP3Q9Y6I4 520 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 SCAMP3O14828 347 aaKnown RBP13.07□□□□□ -0.32
CLDN12-213ENST00000496677 CLSTN1O94985 981 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 SLC6A11P48066 632 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 MORC3Q14149 939 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
CLDN12-213ENST00000496677 ISM2Q6H9L7 571 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 TTI2Q6NXR4 508 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 SYT13Q7L8C5 426 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 SCD5Q86SK9 330 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 PHTF2Q8N3S3 785 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 ZNF276Q8N554 614 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 TTC39CQ8N584 583 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 UBR7Q8N806 425 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 CCDC150Q8NCX0 1101 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 USP33Q8TEY7 942 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 EXOC4Q96A65 974 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 KLF16Q9BXK1 252 aaPredicted RBP13.07□□□□□ -0.32
CLDN12-213ENST00000496677 UBXN6Q9BZV1 441 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 NMUR1Q9HB89 426 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 PARD6AQ9NPB6 346 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 TBC1D14Q9P2M4 693 aa13.07□□□□□ -0.32
CLDN12-213ENST00000496677 HOOK1Q9UJC3 728 aaKnown RBP13.07□□□□□ -0.32
CLDN12-213ENST00000496677 KIAA1549LQ6ZVL6 1849 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 MYOFQ9NZM1 2061 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 MYO16Q9Y6X6 1858 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 PMM2O15305 246 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 TLR5O60602 858 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 TBX18O95935 607 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 SIM2Q14190 667 aaPredicted RBP13.06□□□□□ -0.32
CLDN12-213ENST00000496677 ZNF394Q53GI3 561 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 ARHGAP17Q68EM7 881 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 LAIR1Q6GTX8 287 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 KLHDC10Q6PID8 442 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 HTR3DQ70Z44 454 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 C12orf40Q86WS4 652 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 SFTPA1Q8IWL2 248 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 CAMKK1Q8N5S9 505 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 RPLP0P6Q8NHW5 317 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 LMO3Q8TAP4 145 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 RMDN1Q96DB5 314 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 OTUB2Q96DC9 234 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 TMEM176AQ96HP8 235 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 HEXIM2Q96MH2 286 aaKnown RBP13.06□□□□□ -0.32
CLDN12-213ENST00000496677 CEP63Q96MT8 703 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 TLR8Q9NR97 1041 aaKnown RBP13.06□□□□□ -0.32
CLDN12-213ENST00000496677 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLDN12-213ENST00000496677 NCDNQ9UBB6 729 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 ARMCX3Q9UH62 379 aaPredicted RBP13.06□□□□□ -0.32
CLDN12-213ENST00000496677 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
CLDN12-213ENST00000496677 SLC8A2Q9UPR5 921 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 CACNA1AO00555 2505 aa13.06□□□□□ -0.32
CLDN12-213ENST00000496677 MYH10P35580 1976 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 PSMA7O14818 248 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 CYP26A1O43174 497 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 RETP07949 1114 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 ACO1P21399 889 aaKnown RBP13.05□□□□□ -0.32
CLDN12-213ENST00000496677 EIF2DP41214 584 aaKnown RBP13.05□□□□□ -0.32
CLDN12-213ENST00000496677 ID4P47928 161 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 PXNP49023 591 aaPredicted RBP13.05□□□□□ -0.32
CLDN12-213ENST00000496677 LPAL2Q16609 132 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 DCAF17Q5H9S7 520 aaPredicted RBP13.05□□□□□ -0.32
CLDN12-213ENST00000496677 RAB41Q5JT25 222 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 LY6G5CQ5SRR4 150 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 CCDC186Q7Z3E2 898 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 TMEM25Q86YD3 366 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 ETFBKMTQ8IXQ9 262 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 GPR161Q8N6U8 529 aaKnown RBP13.05□□□□□ -0.32
CLDN12-213ENST00000496677 ANKRD52Q8NB46 1076 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
CLDN12-213ENST00000496677 DLL3Q9NYJ7 618 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 EBF1Q9UH73 591 aa13.05□□□□□ -0.32
CLDN12-213ENST00000496677 A0A1W2PQH9 124 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 HOXC11O43248 304 aaPredicted RBP13.04□□□□□ -0.32
CLDN12-213ENST00000496677 ADH1CP00326 375 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 ADH5P11766 374 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 TRIM21P19474 475 aaKnown RBP13.04□□□□□ -0.32
CLDN12-213ENST00000496677 ATP5C1P36542 298 aaKnown RBP13.04□□□□□ -0.32
CLDN12-213ENST00000496677 PPP1R2P41236 205 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 KIR2DL1P43626 348 aaPredicted RBP13.04□□□□□ -0.32
CLDN12-213ENST00000496677 FMO5P49326 533 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 CUL2Q13617 745 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 DMC1Q14565 340 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 TCERG1LQ5VWI1 586 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 TTC30AQ86WT1 665 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 PNKPQ96T60 521 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 HINFPQ9BQA5 517 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 CLIC5Q9NZA1 410 aa13.04□□□□□ -0.32
CLDN12-213ENST00000496677 LRP3O75074 770 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms