RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PTPRHQ9HD43 1115 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 CD93Q9NPY3 652 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 DSEQ9UL01 958 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 PCDHA12Q9UN75 941 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 PCDHB5Q9Y5E4 795 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 NOTCH2Q04721 2471 aa10.32□□□□□ -0.76
SMARCAL1-213ENST00000496037 DENND4CQ5VZ89 1909 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 A0A1W2PQF6 199 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 E2F8A0AVK6 867 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 C2orf78A6NCI8 922 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 LEFTY2O00292 366 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 ENC1O14682 589 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 PRPF40AO75400 957 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 NFICP08651 508 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 C1SP09871 688 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 MYF5P13349 255 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 IFNAR1P17181 557 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 CYP11B2P19099 503 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 PAX3P23760 479 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 RPIAP49247 311 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 GPR15P49685 360 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 ATP2C1P98194 919 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 SPAG1Q07617 926 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 KIF19Q2TAC6 998 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 BTBD8Q5XKL5 378 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 DHX40Q8IX18 779 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 DCP1BQ8IZD4 617 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 TMEM130Q8N3G9 435 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 KCNE4Q8WWG9 221 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 KIFAP3Q92845 792 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 TRMT2BQ96GJ1 504 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 TOE1Q96GM8 510 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 TARS2Q9BW92 718 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 BACH2Q9BYV9 841 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 RPF1Q9H9Y2 349 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 ANO2Q9NQ90 1003 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 OBSL1O75147 1896 aa10.31□□□□□ -0.76
SMARCAL1-213ENST00000496037 CCDC169A6NNP5 214 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 LAD1O00515 517 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 KLK10O43240 276 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 NOL4O94818 638 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 CXCL8P10145 99 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 CYP3A5P20815 502 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 MAPK1P28482 360 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 CSNK1EP49674 416 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 LILRA4P59901 499 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 RPL10AP62906 217 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 PPP2R3AQ06190 1150 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 NOLC1Q14978 699 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 NTRK3Q16288 839 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 SLC10A6Q3KNW5 377 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 SEZ6Q53EL9 994 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 SDHAF4Q5VUM1 108 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 ADGRG2Q8IZP9 1017 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 KIAA1958Q8N8K9 716 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 C1orf216Q8TAB5 229 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 SNX19Q92543 992 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 BRF1Q92994 677 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 IGSF8Q969P0 613 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 CNDP2Q96KP4 475 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 MRGPRX1Q96LB2 322 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 MYRFLQ96LU7 910 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 ZNF578Q96N58 590 aaPredicted RBP10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 SLC6A17Q9H1V8 727 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 GCNT4Q9P109 453 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 DEC1Q9P2X7 70 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 MAGEC2Q9UBF1 373 aaPredicted RBP10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 EIF2B4Q9UI10 523 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 SNX11Q9Y5W9 270 aa10.3□□□□□ -0.76
SMARCAL1-213ENST00000496037 CITO14578 2027 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 CD2BP2O95400 341 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 LDOC1O95751 146 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 AFPP02771 609 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 CYP11A1P05108 521 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 JUNDP17535 347 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 CR2P20023 1033 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 PROZP22891 400 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 GLDCP23378 1020 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 RIPPLY3P57055 190 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 IL9RQ01113 521 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 TSPY1Q01534 308 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 GAD2Q05329 585 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 SSRP1Q08945 709 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 KRT32Q14532 448 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 CALCRLQ16602 461 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 KIAA1614Q5VZ46 1190 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 EGFLAMQ63HQ2 1017 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 PIK3AP1Q6ZUJ8 805 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 TERB1Q8NA31 727 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 SNRNP27Q8WVK2 155 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 KCNB2Q92953 911 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 PLEKHA5Q9HAU0 1116 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 WSB2Q9NYS7 404 aaPredicted RBP10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 CLCA2Q9UQC9 943 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 ANKRD6Q9Y2G4 727 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 PCDHB6Q9Y5E3 794 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 RAD54BQ9Y620 910 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 FLNCQ14315 2725 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 BSNQ9UPA5 3926 aa10.29□□□□□ -0.76
SMARCAL1-213ENST00000496037 ANO9A1A5B4 782 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms