RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 E5RJQ4 531 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 KIF5CO60282 957 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 SOAT2O75908 522 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 PAPLNO95428 1278 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 VNN2O95498 520 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 FGF19O95750 216 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 ZBED1O96006 694 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 GLI1P08151 1106 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 CFHP08603 1231 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 KRT3P12035 628 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 SP100P23497 879 aaPredicted RBP9.96□□□□□ -0.82
ACTN4-207ENST00000495553 FSHRP23945 695 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 SCNN1AP37088 669 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 GABRB2P47870 512 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 TKTL1P51854 596 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 GSCP56915 257 aaPredicted RBP9.96□□□□□ -0.82
ACTN4-207ENST00000495553 ZP2Q05996 745 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 ADIGQ0VDE8 80 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 PTPN20Q4JDL3 420 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 PABPC1LQ4VXU2 614 aaKnown RBP9.96□□□□□ -0.82
ACTN4-207ENST00000495553 FAM102AQ5T9C2 384 aaPredicted RBP9.96□□□□□ -0.82
ACTN4-207ENST00000495553 CYP4A22Q5TCH4 519 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 PMF1Q6P1K2 205 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 ZNF662Q6ZS27 426 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 DENND5BQ6ZUT9 1274 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 PAQR9Q6ZVX9 377 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 OTOP3Q7RTS5 596 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 TADA2BQ86TJ2 420 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 CCAR2Q8N163 923 aaKnown RBP9.96□□□□□ -0.82
ACTN4-207ENST00000495553 TTC9BQ8N6N2 239 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 TDRD5Q8NAT2 981 aaKnown RBP9.96□□□□□ -0.82
ACTN4-207ENST00000495553 C3orf20Q8ND61 904 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 PDZD8Q8NEN9 1154 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 UBE2Q2Q8WVN8 375 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 IRGQQ8WZA9 623 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 NECAB3Q96P71 396 aaPredicted RBP9.96□□□□□ -0.82
ACTN4-207ENST00000495553 SLITRK1Q96PX8 696 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 CPXM1Q96SM3 734 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 KCNK16Q96T55 309 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 SMOQ99835 787 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 NCAPGQ9BPX3 1015 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 CORO1BQ9BR76 489 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 LZTFL1Q9NQ48 299 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 PYCARDQ9ULZ3 195 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 GUCA1BQ9UMX6 200 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 CLUHO75153 1309 aa9.96□□□□□ -0.82
ACTN4-207ENST00000495553 MYH10P35580 1976 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 GOLGA8SH3BPF8 625 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 MYO1FO00160 1098 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 ZNF197O14709 1029 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 CAPN9O14815 690 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 ZNF263O14978 683 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 PJA2O43164 708 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 HSF2BPO75031 334 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 TUBB4AP04350 444 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 ERBB2P04626 1255 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 CYP1A2P05177 515 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 RHOP08100 348 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 RRM1P23921 792 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 YWHAQP27348 245 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 GBP2P32456 591 aaPredicted RBP9.95□□□□□ -0.82
ACTN4-207ENST00000495553 ARHGAP25P42331 645 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 PPP3CCP48454 512 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 RPL34P49207 117 aaKnown RBP9.95□□□□□ -0.82
ACTN4-207ENST00000495553 PSEN1P49768 467 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 SLC5A3P53794 718 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 NTHL1P78549 312 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 SLC6A3Q01959 620 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 DDR2Q16832 855 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 CCDC142Q17RM4 750 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 RAB41Q5JT25 222 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 PDZD4Q76G19 769 aaPredicted RBP9.95□□□□□ -0.82
ACTN4-207ENST00000495553 GET4Q7L5D6 327 aaPredicted RBP9.95□□□□□ -0.82
ACTN4-207ENST00000495553 SCUBE3Q8IX30 993 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 SYCE1Q8N0S2 351 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 GJD3Q8N144 294 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 SCML4Q8N228 414 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 WDTC1Q8N5D0 677 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 LEMD2Q8NC56 503 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 STKLD1Q8NE28 680 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 SLC35G2Q8TBE7 412 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 FEZF2Q8TBJ5 459 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 KIAA1524Q8TCG1 905 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 GIPC2Q8TF65 315 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 FAM149B1Q96BN6 582 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 GCNAQ96QF7 691 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 CDK5RAP1Q96SZ6 601 aaKnown RBP9.95□□□□□ -0.82
ACTN4-207ENST00000495553 NUP85Q9BW27 656 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 ASAH2Q9NR71 780 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 TLR8Q9NR97 1041 aaKnown RBP9.95□□□□□ -0.82
ACTN4-207ENST00000495553 KCND1Q9NSA2 647 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 HCFC1R1Q9NWW0 138 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 TRMT1Q9NXH9 659 aaKnown RBP9.95□□□□□ -0.82
ACTN4-207ENST00000495553 RRN3Q9NYV6 651 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.95□□□□□ -0.822e-7■■■□□ 15.4
ACTN4-207ENST00000495553 DNMT3BQ9UBC3 853 aaKnown RBP9.95□□□□□ -0.82
ACTN4-207ENST00000495553 NENFQ9UMX5 172 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 USTQ9Y2C2 406 aa9.95□□□□□ -0.82
ACTN4-207ENST00000495553 MRPS23Q9Y3D9 190 aaKnown RBP9.95□□□□□ -0.82
ACTN4-207ENST00000495553 NCANO14594 1321 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms