RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RANBP6O60518 1105 aaKnown RBP7.39□□□□□ -1.23
VIM-207ENST00000495528 TMEM127O75204 238 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 VSIG10L2P0DP72 767 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 AGXTP21549 392 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 RFC2P35250 354 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 SLC5A3P53794 718 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 RIN1Q13671 783 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 GPNMBQ14956 572 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 TTC22Q5TAA0 569 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 VPS53Q5VIR6 699 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 NFRKBQ6P4R8 1299 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 BTNL9Q6UXG8 535 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 SLC30A10Q6XR72 485 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 HERC6Q8IVU3 1022 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 GLB1L3Q8NCI6 653 aaPredicted RBP7.39□□□□□ -1.23
VIM-207ENST00000495528 ARNTL2Q8WYA1 636 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 RELTQ969Z4 430 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 FAM122AQ96E09 287 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 CEP89Q96ST8 783 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 TMEM47Q9BQJ4 181 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 C1QTNF1Q9BXJ1 281 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 FTOQ9C0B1 505 aaKnown RBP eCLIP7.39□□□□□ -1.23
VIM-207ENST00000495528 AGO3Q9H9G7 860 aaKnown RBP7.39□□□□□ -1.23
VIM-207ENST00000495528 DMRT3Q9NQL9 472 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 TLR9Q9NR96 1032 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 ADD3Q9UEY8 706 aaKnown RBP7.39□□□□□ -1.23
VIM-207ENST00000495528 PCDHGA9Q9Y5G4 932 aaKnown RBP7.39□□□□□ -1.23
VIM-207ENST00000495528 PCDHGA8Q9Y5G5 932 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 PCDHGA7Q9Y5G6 932 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 PCDHGA6Q9Y5G7 932 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 PCDHGA3Q9Y5H0 932 aa7.39□□□□□ -1.23
VIM-207ENST00000495528 PRRC2BQ5JSZ5 2229 aaKnown RBP7.38□□□□□ -1.23
VIM-207ENST00000495528 LOC102724159A0A0B4J2E5 919 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 A0A1W2PRX2 142 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 KLHL33A6NCF5 533 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 KIF28PB7ZC32 967 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 ORC4O43929 436 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 LPXNO60711 386 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 ARIH2O95376 493 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 LTA4HP09960 611 aaKnown RBP7.38□□□□□ -1.23
VIM-207ENST00000495528 TXNP10599 105 aaKnown RBP7.38□□□□□ -1.23
VIM-207ENST00000495528 RBP3P10745 1247 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 EDNRBP24530 442 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 RPS6P62753 249 aaKnown RBP7.38□□□□□ -1.23
VIM-207ENST00000495528 ADAM8P78325 824 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 PPP2R5BQ15173 497 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 PWP2Q15269 919 aaKnown RBP7.38□□□□□ -1.23
VIM-207ENST00000495528 ADRM1Q16186 407 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 MBNL2Q5VZF2 373 aaKnown RBP7.38□□□□□ -1.23
VIM-207ENST00000495528 TCTN3Q6NUS6 607 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 RNF207Q6ZRF8 634 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 TAS1R1Q7RTX1 841 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 TMCO2Q7Z6W1 182 aaPredicted RBP7.38□□□□□ -1.23
VIM-207ENST00000495528 JADE3Q92613 823 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 RABGGTAQ92696 567 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 LRFN3Q9BTN0 628 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 TYW1Q9NV66 732 aaKnown RBP7.38□□□□□ -1.23
VIM-207ENST00000495528 ANAPC4Q9UJX5 808 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 COG5Q9UP83 839 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 DNM3Q9UQ16 869 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 MRFAP1Q9Y605 127 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 TCF20Q9UGU0 1960 aaKnown RBP7.38□□□□□ -1.23
VIM-207ENST00000495528 MYH7P12883 1935 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 MYH4Q9Y623 1939 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 NCOR1O75376 2440 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 CHD7Q9P2D1 2997 aa7.38□□□□□ -1.23
VIM-207ENST00000495528 UBE2QL1A1L167 161 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 FOXD2O60548 495 aaPredicted RBP7.37□□□□□ -1.23
VIM-207ENST00000495528 FGAP02671 866 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 ITGB3P05106 788 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 JUNP05412 331 aaKnown RBP7.37□□□□□ -1.23
VIM-207ENST00000495528 PDHBP11177 359 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 TOP1P11387 765 aaKnown RBP7.37□□□□□ -1.23
VIM-207ENST00000495528 CTSSP25774 331 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 ADSLP30566 484 aaPredicted RBP7.37□□□□□ -1.23
VIM-207ENST00000495528 BFSP2Q13515 415 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 PTGISQ16647 500 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 RRP12Q5JTH9 1297 aaKnown RBP7.37□□□□□ -1.23
VIM-207ENST00000495528 LILRA6Q6PI73 481 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 SCFD2Q8WU76 684 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 RIN2Q8WYP3 895 aaPredicted RBP7.37□□□□□ -1.23
VIM-207ENST00000495528 TBC1D5Q92609 795 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 FATE1Q969F0 183 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 LOXL4Q96JB6 756 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 CTAGE1Q96RT6 745 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 RBM15Q96T37 977 aaKnown RBP eCLIP7.37□□□□□ -1.232e-11■■□□□ 14.4
VIM-207ENST00000495528 SSBP3Q9BWW4 388 aaPredicted RBP7.37□□□□□ -1.23
VIM-207ENST00000495528 TCP11L1Q9NUJ3 509 aa7.37□□□□□ -1.23
VIM-207ENST00000495528 ZFR2Q9UPR6 939 aaKnown RBP7.37□□□□□ -1.23
VIM-207ENST00000495528 RAD50Q92878 1312 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 FOXS1O43638 330 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 AKR1B10O60218 316 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 BAIAP3O94812 1187 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 GSPT1P15170 499 aaKnown RBP7.36□□□□□ -1.23
VIM-207ENST00000495528 CASRP41180 1078 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 WDR5P61964 334 aaKnown RBP7.36□□□□□ -1.23
VIM-207ENST00000495528 DEFB103AP81534 67 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 ZNF543Q08ER8 600 aa7.36□□□□□ -1.23
VIM-207ENST00000495528 ODF1Q14990 250 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms