RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 NOLC1Q14978 699 aaKnown RBP eCLIP15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 PRAMEF14Q5SWL7 426 aa15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 TAS1R3Q7RTX0 852 aa15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 ADAT2Q7Z6V5 191 aaKnown RBP15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 CACUL1Q86Y37 369 aa15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 ASCL3Q9NQ33 180 aa15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 THSD1Q9NS62 852 aa15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 ADAMTS1Q9UHI8 967 aa15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 CKAP5Q14008 2032 aa15.59■□□□□ 0.09
CHMP2B-205ENST00000494980 ARHGEF35A5YM69 484 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 HOXC11O43248 304 aaPredicted RBP15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 DFNA5O60443 496 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 MT-CO3P00414 261 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 FAM87AP0C7U9 286 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 AFMP43652 599 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 SLC7A9P82251 487 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 IGFBP7Q16270 282 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 GRAMD4Q6IC98 578 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 FAM124AQ86V42 546 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 EXTL1Q92935 676 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 MMS19Q96T76 1030 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 NUP58Q9BVL2 599 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 C6orf106Q9H6K1 298 aaPredicted RBP15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 OSGEPQ9NPF4 335 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 PCDHA12Q9UN75 941 aa15.58■□□□□ 0.08
CHMP2B-205ENST00000494980 MTORP42345 2549 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 PDZD2O15018 2839 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 TTC26A0AVF1 554 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 CCDC169A6NNP5 214 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 CYB561D2O14569 222 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 XPOTO43592 962 aaKnown RBP15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 SPATA31C1P0DKV0 1188 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 IFNAR1P17181 557 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 ORC1Q13415 861 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 STARD3Q14849 445 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 ANO4Q32M45 955 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 WSCD1Q658N2 575 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 XKR5Q6UX68 686 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 SCFD1Q8WVM8 642 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 PYM1Q9BRP8 204 aaKnown RBP15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 RNF38Q9H0F5 515 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 PLEKHA5Q9HAU0 1116 aa15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.57■□□□□ 0.08
CHMP2B-205ENST00000494980 DNHD1Q96M86 4753 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 PRRT4C9JH25 899 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 USP12O75317 370 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 IGLV3-19P01714 112 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 PFKLP17858 780 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 LSSP48449 732 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 FOSBP53539 338 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 FOXK1P85037 733 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 TSPY1Q01534 308 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 PPP2R3AQ06190 1150 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 NFE2Q16621 373 aaPredicted RBP15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 ZSCAN23Q3MJ62 389 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 ARL13BQ3SXY8 428 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 C9orf57Q5W0N0 161 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 GALNT17Q6IS24 598 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 SAP25Q8TEE9 199 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 KIFAP3Q92845 792 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 SIPA1Q96FS4 1042 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 ELF4Q99607 663 aaPredicted RBP15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 NAP1L4Q99733 375 aaKnown RBP15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 PCED1AQ9H1Q7 454 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 EPN3Q9H201 632 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 POLR1BQ9H9Y6 1135 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 DNAJC17Q9NVM6 304 aaKnown RBP15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 TBC1D14Q9P2M4 693 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 KIF26BQ2KJY2 2108 aa15.56■□□□□ 0.08
CHMP2B-205ENST00000494980 GFRA2O00451 464 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 NPTX2P47972 431 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 PEX3P56589 373 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 C21orf59P57076 290 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 SHBQ15464 509 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 ADCK5Q3MIX3 580 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 PIK3AP1Q6ZUJ8 805 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 CATSPER3Q86XQ3 398 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 TMPRSS6Q8IU80 811 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 SCN4BQ8IWT1 228 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 LEO1Q8WVC0 666 aaPredicted RBP15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 TMEM134Q9H6X4 195 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 NCOA5Q9HCD5 579 aaKnown RBP15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 ABCB6Q9NP58 842 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 KCNJ14Q9UNX9 436 aa15.55■□□□□ 0.08
CHMP2B-205ENST00000494980 PCNX1Q96RV3 2341 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 MED13Q9UHV7 2174 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 LACTBL1A8MY62 500 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 MED24O75448 989 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 CLTAP09496 248 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 CKMT2P17540 419 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 PAX3P23760 479 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 ELAVL4P26378 380 aaKnown RBP15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 ST3GAL1Q11201 340 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 CCDC142Q17RM4 750 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 SPATA1Q5VX52 437 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 TMEM25Q86YD3 366 aa15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 PRCCQ92733 491 aaPredicted RBP15.54■□□□□ 0.08
CHMP2B-205ENST00000494980 BRF1Q92994 677 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms