RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SATL1Q86VE3 508 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 THNSL1Q8IYQ7 743 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 KCNN1Q92952 543 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 ATXN10Q9UBB4 475 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 I3L4J1 428 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 YWHAGP61981 247 aaKnown RBP eCLIP15.97■□□□□ 0.15
SDF4-207ENST00000494748 WASHC5Q12768 1159 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
SDF4-207ENST00000494748 PTPN20Q4JDL3 420 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 NPNTQ6UXI9 565 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 OLFM3Q96PB7 478 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 POLR3FQ9H1D9 316 aaPredicted RBP15.97■□□□□ 0.15
SDF4-207ENST00000494748 VCX3BQ9H321 246 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 EPB41L1Q9H4G0 881 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 VCX3AQ9NNX9 186 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 GABBR1Q9UBS5 961 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 COL11A1P12107 1806 aaPredicted RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 H3BNX3 289 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 PIGRP01833 764 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 BPGMP07738 259 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 NCOA4Q13772 614 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 EFHC1Q5JVL4 640 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 SDCCAG8Q86SQ7 713 aaPredicted RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 NCAPG2Q86XI2 1143 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 CMASQ8NFW8 434 aaPredicted RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 RAB3IL1Q8TBN0 382 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 PCDHGC3Q9UN70 934 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 CSDE1O75534 798 aaKnown RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 SPAG6O75602 509 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 ASS1P00966 412 aaKnown RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 ATP5BP06576 529 aaKnown RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 SNRPAP09012 282 aaKnown RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 CSH1P0DML2 217 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 CSH2P0DML3 217 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 PSMA2P25787 234 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 BMPR2Q13873 1038 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 ATG16L1Q676U5 607 aa15.96■□□□□ 0.15
SDF4-207ENST00000494748 FAM43BQ6ZT52 329 aaPredicted RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 CYP4V2Q6ZWL3 525 aaPredicted RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 CAND1Q86VP6 1230 aaKnown RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 ST13P4Q8IZP2 240 aaPredicted RBP15.96■□□□□ 0.15
SDF4-207ENST00000494748 RBP3P10745 1247 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 VCLP18206 1134 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 RPS6P62753 249 aaKnown RBP15.95■□□□□ 0.14
SDF4-207ENST00000494748 LRRC36Q1X8D7 754 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 ZCCHC23Q6ZST2 131 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 RASSF3Q86WH2 238 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 ADGRF2Q8IZF7 708 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 PPM1NQ8N819 430 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 TMEM35BQ8NCS4 154 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 CFAP36Q96G28 342 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 PDCD2LQ9BRP1 358 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 ETNK2Q9NVF9 386 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 SLC9A2Q9UBY0 812 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 IKBKGQ9Y6K9 419 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 SF3B1O75533 1304 aaKnown RBP eCLIP15.95■□□□□ 0.142e-7■■■■■ 85.3
SDF4-207ENST00000494748 CFAP157Q5JU67 520 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 C6orf163Q5TEZ5 329 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 TRIM42Q8IWZ5 723 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 ZNF518BQ9C0D4 1074 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 USP29Q9HBJ7 922 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 PCDHA10Q9Y5I2 948 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 LCTP09848 1927 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 CASQ2O14958 399 aaPredicted RBP15.95■□□□□ 0.14
SDF4-207ENST00000494748 CHADO15335 359 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 ITM2AO43736 263 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 ATP9BO43861 1147 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 DGAT1O75907 488 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 EIF4BP23588 611 aaKnown RBP15.95■□□□□ 0.14
SDF4-207ENST00000494748 SEZ6Q53EL9 994 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 DENND1BQ6P3S1 775 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 RDM1Q8NG50 284 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 PEBP4Q96S96 227 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 TRIM56Q9BRZ2 755 aaKnown RBP15.95■□□□□ 0.14
SDF4-207ENST00000494748 SLC13A1Q9BZW2 595 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 TMX4Q9H1E5 349 aaPredicted RBP15.95■□□□□ 0.14
SDF4-207ENST00000494748 PXMP2Q9NR77 195 aa15.95■□□□□ 0.14
SDF4-207ENST00000494748 TCP10L2B9ZVM9 353 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 VILLO15195 856 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 ENDOD1O94919 500 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 KRT7P08729 469 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 MYCLP12524 364 aaPredicted RBP15.94■□□□□ 0.14
SDF4-207ENST00000494748 VAV1P15498 845 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 RANBP1P43487 201 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 TBL3Q12788 808 aaKnown RBP15.94■□□□□ 0.14
SDF4-207ENST00000494748 HIC1Q14526 733 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 NOMO1Q15155 1222 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 LRRC23Q53EV4 343 aaPredicted RBP15.94■□□□□ 0.14
SDF4-207ENST00000494748 SPATA24Q86W54 205 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 NUDCD3Q8IVD9 361 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 FNIP1Q8TF40 1166 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 USP6NLQ92738 828 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 MMP19Q99542 508 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 CYP26B1Q9NR63 512 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 FAM189A1O60320 539 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 CRHR1P34998 444 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 MMRN1Q13201 1228 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 ZNF394Q53GI3 561 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 DPY19L2Q6NUT2 758 aa15.94■□□□□ 0.14
SDF4-207ENST00000494748 MCPH1Q8NEM0 835 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms