RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 TRPA1O75762 1119 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 EDN1P05305 212 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 SCNN1GP51170 649 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 GAD2Q05329 585 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 AUHQ13825 339 aaKnown RBP11.45□□□□□ -0.58
COL2A1-208ENST00000493991 PDE1CQ14123 709 aaPredicted RBP11.45□□□□□ -0.58
COL2A1-208ENST00000493991 NBPF20Q3BBV1 942 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 SLC10A6Q3KNW5 377 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 FOXR2Q6PJQ5 311 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 CRELD2Q6UXH1 353 aaPredicted RBP11.45□□□□□ -0.58
COL2A1-208ENST00000493991 NDUFAF2Q8N183 169 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 C3orf20Q8ND61 904 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 OR6P1Q8NGX9 317 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 RAB3IL1Q8TBN0 382 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 RNF217Q8TC41 542 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 SREK1Q8WXA9 508 aaKnown RBP11.45□□□□□ -0.58
COL2A1-208ENST00000493991 SLITRK1Q96PX8 696 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 DPEP3Q9H4B8 488 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 UBQLN1Q9UMX0 589 aaKnown RBP11.45□□□□□ -0.58
COL2A1-208ENST00000493991 CFLARO15519 480 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 ETFBP38117 255 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 TKTL1P51854 596 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 TAP1Q03518 808 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 MFSD10Q14728 455 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 MTHFD1LQ6UB35 978 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 CLEC4CQ8WTT0 213 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 TMEM134Q9H6X4 195 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 NMRK2Q9NPI5 230 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 DDX43Q9NXZ2 648 aaKnown RBP11.45□□□□□ -0.58
COL2A1-208ENST00000493991 ZFATQ9P243 1243 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 SCOCQ9UIL1 159 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 KPNA7A9QM74 516 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 NDC80O14777 642 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SPTLC1O15269 473 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 GAS2O43903 313 aaKnown RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 ENDOD1O94919 500 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 KRT16P08779 473 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SMIM10L2AP0DMW4 78 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SMIM10L2BP0DMW5 78 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SMPD1P17405 629 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SLC26A2P50443 739 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 ARL13BQ3SXY8 428 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SLC30A9Q6PML9 568 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 NUDCD3Q8IVD9 361 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SLC25A41Q8N5S1 370 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 STKLD1Q8NE28 680 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 PIP4K2CQ8TBX8 421 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 GPR152Q8TDT2 470 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 PAFAH2Q99487 392 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 HERPUD2Q9BSE4 406 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 CDHR5Q9HBB8 845 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 AVENQ9NQS1 362 aaPredicted RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 TNFSF13BQ9Y275 285 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 TMEM191CA6NGB0 347 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 KBTBD13C9JR72 458 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 LUC7L3O95232 432 aaKnown RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 USP17L7P0C7H9 530 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 FAM200BP0CF97 657 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 KDELR1P24390 212 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 LMO2P25791 158 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 PEX5P50542 639 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 MFSD14CQ5VZR4 134 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 BTBD8Q5XKL5 378 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SLC27A1Q6PCB7 646 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SLFN11Q7Z7L1 901 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 PPIL6Q8IXY8 311 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 IPMKQ8NFU5 416 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 SH3GL3Q99963 347 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 ACSS2Q9NR19 701 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 CPSF3Q9UKF6 684 aaKnown RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 XIRP1Q702N8 1843 aaKnown RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 CHD4Q14839 1912 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 N4BP2Q86UW6 1770 aaPredicted RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 EEF2KO00418 725 aaKnown RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 PPFIA2O75334 1257 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 LRCH4O75427 683 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 CYP2F1P24903 491 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 RPL22P35268 128 aaKnown RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 PMF1Q6P1K2 205 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 MON1BQ7L1V2 547 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 MYLK4Q86YV6 388 aaPredicted RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 CCDC97Q96F63 343 aaPredicted RBP11.44□□□□□ -0.58
COL2A1-208ENST00000493991 LGMNQ99538 433 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 PLEKHA5Q9HAU0 1116 aa11.44□□□□□ -0.58
COL2A1-208ENST00000493991 LOC100653049A0A140TA62 436 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 A0A1W2PPM1 405 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 FSCN2O14926 492 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 KRT34O76011 436 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 MCF2P10911 925 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 ELNP15502 786 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 YBX3P16989 372 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 SOX11P35716 441 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 OGDHQ02218 1023 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 CRYMQ14894 314 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 LRRC23Q53EV4 343 aaPredicted RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 RAB6CQ53S08 254 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 KCNT2Q6UVM3 1135 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 ZCCHC23Q6ZST2 131 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 EXOC3L1Q86VI1 746 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 RASGEF1CQ8N431 466 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms