RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 GTF2F1P35269 517 aaKnown RBP eCLIP15.65■□□□□ 0.1
ACTB-213ENST00000493945 MAGEA1P43355 309 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 DAOAP59103 153 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 GPC5P78333 572 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 TAF10Q12962 218 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 PM20D1Q6GTS8 502 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 BEND5Q7L4P6 421 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 SLC26A9Q7LBE3 791 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 RHOT2Q8IXI1 618 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 WDTC1Q8N5D0 677 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 GPR152Q8TDT2 470 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 HLA-CQ95604 372 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 NCAPGQ9BPX3 1015 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 ATXN3LQ9H3M9 355 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 UBE2ZQ9H832 354 aaPredicted RBP15.65■□□□□ 0.1
ACTB-213ENST00000493945 POPDC2Q9HBU9 364 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 IL37Q9NZH6 218 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 UVRAGQ9P2Y5 699 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 CNOT8Q9UFF9 292 aaKnown RBP15.65■□□□□ 0.1
ACTB-213ENST00000493945 MRPS23Q9Y3D9 190 aaKnown RBP15.65■□□□□ 0.1
ACTB-213ENST00000493945 PAXBP1Q9Y5B6 917 aa15.65■□□□□ 0.1
ACTB-213ENST00000493945 ZSCAN12O43309 604 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 ABL1P00519 1130 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 ERBB2P04626 1255 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 KRT3P12035 628 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 ABCB4P21439 1286 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 EPHA5P54756 1037 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 YWHAGP61981 247 aaKnown RBP eCLIP15.64■□□□□ 0.09
ACTB-213ENST00000493945 YWHAZP63104 245 aaKnown RBP15.64■□□□□ 0.09
ACTB-213ENST00000493945 KIF5AQ12840 1032 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 AAK1Q2M2I8 961 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 FAM183BPQ6ZVS7 135 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 ARCQ7LC44 396 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 GPRIN1Q7Z2K8 1008 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 XYLT1Q86Y38 959 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 SCAMP5Q8TAC9 235 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 SLITRK6Q9H5Y7 841 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 TMEM30AQ9NV96 361 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 CYTH4Q9UIA0 394 aa15.64■□□□□ 0.09
ACTB-213ENST00000493945 ZFP37Q9Y6Q3 630 aaPredicted RBP15.64■□□□□ 0.09
ACTB-213ENST00000493945 TRAV19A0A0A6YYK7 116 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 GOLGA8SH3BPF8 625 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 LINC01565O15544 149 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 PAPSS1O43252 624 aaPredicted RBP15.63■□□□□ 0.09
ACTB-213ENST00000493945 KRT86O43790 486 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 TBX10O75333 385 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 DAB1O75553 588 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 HMGA1P17096 107 aaKnown RBP15.63■□□□□ 0.09
ACTB-213ENST00000493945 FSHRP23945 695 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 GBP1P32455 592 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 KPNA1P52294 538 aaPredicted RBP15.63■□□□□ 0.09
ACTB-213ENST00000493945 VAV2P52735 878 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 GALCP54803 685 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 MTA1Q13330 715 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 SMAD4Q13485 552 aaKnown RBP15.63■□□□□ 0.09
ACTB-213ENST00000493945 CCDC85BQ15834 202 aaPredicted RBP15.63■□□□□ 0.09
ACTB-213ENST00000493945 HECTD3Q5T447 861 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 OLFML1Q6UWY5 402 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 GRASPQ7Z6J2 395 aaPredicted RBP15.63■□□□□ 0.09
ACTB-213ENST00000493945 DDX42Q86XP3 938 aaKnown RBP eCLIP15.63■□□□□ 0.098e-24■□□□□ 9.5
ACTB-213ENST00000493945 TMEM139Q8IV31 216 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 SCUBE3Q8IX30 993 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 SMRP1Q8NCR6 262 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 PPM1EQ8WY54 764 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 RFFLQ8WZ73 363 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 ZNF707Q96C28 371 aaPredicted RBP15.63■□□□□ 0.09
ACTB-213ENST00000493945 MCRS1Q96EZ8 462 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 WDR6Q9NNW5 1121 aaKnown RBP15.63■□□□□ 0.09
ACTB-213ENST00000493945 GMIPQ9P107 970 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 CTTNBP2NLQ9P2B4 639 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 PCDHA13Q9Y5I0 950 aa15.63■□□□□ 0.09
ACTB-213ENST00000493945 DENND4CQ5VZ89 1909 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 C2orf16Q68DN1 1984 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 GOLGA6L9A6NEM1 432 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 PIK3R2O00459 728 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 NCAM1P13591 858 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 KCNA5P22460 613 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 SDC4P31431 198 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 AVPR1AP37288 418 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 USP46P62068 366 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 CCZ1BP86790 482 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 CCZ1P86791 482 aaPredicted RBP15.62■□□□□ 0.09
ACTB-213ENST00000493945 MTMR3Q13615 1198 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 HS1BP3Q53T59 392 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 SNX30Q5VWJ9 437 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 KLHDC10Q6PID8 442 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 SYCE2Q6PIF2 218 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 RAD9BQ6WBX8 426 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 SND1Q7KZF4 910 aaKnown RBP eCLIP15.62■□□□□ 0.092e-17■□□□□ 9.8
ACTB-213ENST00000493945 TMC8Q8IU68 726 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 ZNF276Q8N554 614 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 C12orf76Q8N812 135 aaPredicted RBP15.62■□□□□ 0.09
ACTB-213ENST00000493945 MAFAQ8NHW3 353 aaPredicted RBP15.62■□□□□ 0.09
ACTB-213ENST00000493945 SERPINB11Q96P15 392 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 METTL5Q9NRN9 209 aaKnown RBP15.62■□□□□ 0.09
ACTB-213ENST00000493945 TAS2R14Q9NYV8 317 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.62■□□□□ 0.091e-15■□□□□ 9.7
ACTB-213ENST00000493945 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.62■□□□□ 0.09
ACTB-213ENST00000493945 CLEC1BQ9P126 229 aa15.62■□□□□ 0.09
ACTB-213ENST00000493945 DNMT3BQ9UBC3 853 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms