RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SEC23AQ15436 765 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ARSHQ5FYA8 562 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 HERC4Q5GLZ8 1057 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 EFHC1Q5JVL4 640 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 LDLRAP1Q5SW96 308 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 RARS2Q5T160 578 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 C10orf62Q5T681 223 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CTRB2Q6GPI1 263 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CYP20A1Q6UW02 462 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 NLRP4Q96MN2 994 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 UROC1Q96N76 676 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 DEPDC7Q96QD5 511 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 SLC38A10Q9HBR0 1119 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 POLMQ9NP87 494 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 EBF1Q9UH73 591 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CPSF3Q9UKF6 684 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 DNM3Q9UQ16 869 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 NIP7Q9Y221 180 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF652Q9Y2D9 606 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 PJA2O43164 708 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 GTPBP6O43824 516 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 EDF1O60869 148 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 KLHL2O95198 593 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 PSMC3P17980 439 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 SCNN1DP51172 638 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 PEX3P56589 373 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ACTR3P61158 418 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ECT2LQ008S8 904 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 OCA2Q04671 838 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 HNRNPDQ14103 355 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 DPYSQ14117 519 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF174Q15697 407 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 TRIM71Q2Q1W2 868 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 SCARA3Q6AZY7 606 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CCBE1Q6UXH8 406 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ATG14Q6ZNE5 492 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 C11orf96Q7Z7L8 435 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 PRUNE1Q86TP1 453 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 TMEM151BQ8IW70 566 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 LSMEM2Q8N112 164 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 PMM1Q92871 262 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 TNFRSF25Q93038 417 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 C12orf43Q96C57 262 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 DCUN1D1Q96GG9 259 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 EGLN2Q96KS0 407 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 RILPQ96NA2 401 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CDK5RAP1Q96SZ6 601 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CDH19Q9H159 772 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 C12orf10Q9HB07 376 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 LY9Q9HBG7 655 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 STK36Q9NRP7 1315 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 KLHL42Q9P2K6 505 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ASIC3Q9UHC3 531 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 AMFRQ9UKV5 643 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 VPS4AQ9UN37 437 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 LOXHD1Q8IVV2 1947 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 A0A087X0B3 334 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 A0A1W2PPW3 197 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 SOBPA7XYQ1 873 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 GSG1L2A8MUP6 293 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 H0YC42 278 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 MEN1O00255 615 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 SH2B2O14492 632 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CLASP2O75122 1294 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 DAB1O75553 588 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ALX3O95076 343 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 FKBP9O95302 570 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ITGAXP20702 1163 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 TPD52P55327 224 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ARPP19P56211 112 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 POU6F2P78424 691 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 DNASE1L3Q13609 305 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 DNAL1Q4LDG9 190 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 C6orf52Q5T4I8 152 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 BTBD8Q5XKL5 378 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CYP4F22Q6NT55 531 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 LDHAL6AQ6ZMR3 332 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 OTOAQ7RTW8 1153 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 NLRX1Q86UT6 975 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CPNE9Q8IYJ1 553 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 SPATA20Q8TB22 786 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 BTBD9Q96Q07 612 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CDC42EP4Q9H3Q1 356 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 SMARCAD1Q9H4L7 1026 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 GDAP2Q9NXN4 497 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 SLC7A8Q9UHI5 535 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 DICER1Q9UPY3 1922 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 MEI4A8MW99 385 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 MTSS1O43312 755 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 RARGP13631 454 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 CXCR2P25025 360 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 ALDH1A3P47895 512 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 BMXP51813 675 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 RCAN1P53805 252 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 PMS1P54277 932 aaKnown RBP7.1□□□□□ -1.27
VPS13B-205ENST00000493587 CACNB3P54284 484 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 XIAPP98170 497 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 TRPC3Q13507 836 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 GK3PQ14409 553 aa7.1□□□□□ -1.27
VPS13B-205ENST00000493587 CEP55Q53EZ4 464 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms