RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 EDEM3Q9BZQ6 932 aa8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 GANQ9H2C0 597 aa8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 IL21Q9HBE4 155 aa8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 CYLDQ9NQC7 956 aa8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 CNGB3Q9NQW8 809 aa8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 OLA1Q9NTK5 396 aaKnown RBP8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 ZNHIT6Q9NWK9 470 aaKnown RBP8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 OBP2AQ9NY56 170 aa8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 LSM7Q9UK45 103 aaKnown RBP8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 MYO6Q9UM54 1294 aa8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 PCDHGC3Q9UN70 934 aa8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 SH3BP1Q9Y3L3 701 aa8.55□□□□□ -1.04
TM4SF1-204ENST00000493348 NCANO14594 1321 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 TTC28Q96AY4 2481 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 A0A1W2PQH9 124 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 C2orf78A6NCI8 922 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 GOLGA6L6A8MZA4 724 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 PIK3R2O00459 728 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 SLC9A3R1O14745 358 aaPredicted RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 TLR5O60602 858 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 MOSPD3O75425 235 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 LSM8O95777 96 aaKnown RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 CALCAP01258 141 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 PNMA6AP0CW24 399 aaPredicted RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 SRFP11831 508 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 RARGP13631 454 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 TNFAIP3P21580 790 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 WEE1P30291 646 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 GDI1P31150 447 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 CLCN1P35523 988 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 VIPR2P41587 438 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 NSFP46459 744 aaKnown RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 YWHAGP61981 247 aaKnown RBP eCLIP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 AMPD2Q01433 879 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 NR1H3Q13133 447 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 GRM2Q14416 872 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 ZNF268Q14587 947 aaPredicted RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 ARHGAP29Q52LW3 1261 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 TDRD12Q587J7 1177 aaKnown RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 TANGO2Q6ICL3 276 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 OR6B2Q6IFH4 312 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 DENND1BQ6P3S1 775 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 TRIM72Q6ZMU5 477 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 TOGARAM2Q6ZUX3 1019 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 ERICH1Q86X53 443 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 GPIHBP1Q8IV16 184 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 SLC44A3Q8N4M1 653 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 ST13P5Q8NFI4 369 aaPredicted RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 CPLX3Q8WVH0 158 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 RSAD2Q8WXG1 361 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 IRGQQ8WZA9 623 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 FGF14Q92915 247 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 SHDQ96IW2 340 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 PPP1R13BQ96KQ4 1090 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 ZSWIM3Q96MP5 696 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 SLC46A2Q9BY10 475 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 ULBP1Q9BZM6 244 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 XPO4Q9C0E2 1151 aaKnown RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 LHX5Q9H2C1 402 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 TRPV4Q9HBA0 871 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 SCUBE2Q9NQ36 999 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 ABCC13Q9NSE7 274 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 TMEM30AQ9NV96 361 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 CLIC5Q9NZA1 410 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 RASAL2Q9UJF2 1139 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 DNMT3LQ9UJW3 386 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 AJAP1Q9UKB5 411 aaPredicted RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 DUSP12Q9UNI6 340 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 LUC7L2Q9Y383 392 aaKnown RBP8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 CPQQ9Y646 472 aa8.54□□□□□ -1.04
TM4SF1-204ENST00000493348 ANKRD62A6NC57 917 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 LRRC53A6NM62 1247 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 HHLA1C9JL84 531 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 ANHXE9PGG2 379 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 CHADO15335 359 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 LTFP02788 710 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 CFHP08603 1231 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 IRF1P10914 325 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 GPD2P43304 727 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 KPNA1P52294 538 aaPredicted RBP8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 JAM2P57087 298 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 COG7P83436 770 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 ZXDAP98168 799 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 CDR2Q01850 454 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 SIGLEC14Q08ET2 396 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 KLHL30Q0D2K2 578 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 EFEMP1Q12805 493 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 PDCLQ13371 301 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 FIGNQ5HY92 759 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 RAB41Q5JT25 222 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 EFHC1Q5JVL4 640 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 SNX30Q5VWJ9 437 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 SPECC1LQ69YQ0 1117 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 PMF1Q6P1K2 205 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 APTXQ7Z2E3 356 aaKnown RBP8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 GPRIN1Q7Z2K8 1008 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 ZDHHC17Q8IUH5 632 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 DRC7Q8IY82 874 aa8.53□□□□□ -1.04
TM4SF1-204ENST00000493348 C1orf131Q8NDD1 294 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms