RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 BTBD8Q5XKL5 378 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 TADA2BQ86TJ2 420 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 SH3RF2Q8TEC5 729 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 STK32AQ8WU08 396 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 NOX5Q96PH1 765 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 MIS12Q9H081 205 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 OSER1Q9NX31 292 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 CLIC5Q9NZA1 410 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 WNT16Q9UBV4 365 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 NUDT5Q9UKK9 219 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 CPQQ9Y646 472 aa14.68□□□□□ -0.06
CCM2-217ENST00000492883 LEFTY2O00292 366 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 CHADO15335 359 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 GABBR2O75899 941 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 FBXO21O94952 628 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 OLFM2O95897 454 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 TBX18O95935 607 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 CCDC172P0C7W6 258 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 PLCB2Q00722 1185 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 FCHO2Q0JRZ9 810 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 ARHGAP29Q52LW3 1261 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 C10orf120Q5SQS8 335 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 RSRC2Q7L4I2 434 aaKnown RBP14.67□□□□□ -0.06
CCM2-217ENST00000492883 NOP9Q86U38 636 aaKnown RBP14.67□□□□□ -0.06
CCM2-217ENST00000492883 SCUBE3Q8IX30 993 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 WDTC1Q8N5D0 677 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 TMEM35BQ8NCS4 154 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 GOLGA1Q92805 767 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 ZFYVE19Q96K21 471 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 CDK5RAP1Q96SZ6 601 aaKnown RBP14.67□□□□□ -0.06
CCM2-217ENST00000492883 NUP58Q9BVL2 599 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 C1QTNF1Q9BXJ1 281 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 SLC4A5Q9BY07 1137 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 CYLDQ9NQC7 956 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 GKN1Q9NS71 199 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCM2-217ENST00000492883 DNMT3LQ9UJW3 386 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 CA14Q9ULX7 337 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 DENND4AQ7Z401 1863 aa14.67□□□□□ -0.06
CCM2-217ENST00000492883 TMEM221A6NGB7 291 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 YJEFN3A6XGL0 299 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 E7ENQ6 273 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 M0R296 226 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 CBFA2T2O43439 604 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 MMEP08473 750 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 RPL34P49207 117 aaKnown RBP14.66□□□□□ -0.06
CCM2-217ENST00000492883 SNX16P57768 344 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 DAOAP59103 153 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 PDCLQ13371 301 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 MTF1Q14872 753 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 SLC44A4Q53GD3 710 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 BSPRYQ5W0U4 402 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 TMEM110Q86TL2 294 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 DDX42Q86XP3 938 aaKnown RBP eCLIP14.66□□□□□ -0.06
CCM2-217ENST00000492883 ZNF677Q86XU0 584 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 FMNL3Q8IVF7 1028 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 SIX5Q8N196 739 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 SCML4Q8N228 414 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 C1orf131Q8NDD1 294 aaKnown RBP14.66□□□□□ -0.06
CCM2-217ENST00000492883 CSGALNACT1Q8TDX6 532 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 EPS8L1Q8TE68 723 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 RNF139Q8WU17 664 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 IRGQQ8WZA9 623 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 DDX1Q92499 740 aaKnown RBP14.66□□□□□ -0.06
CCM2-217ENST00000492883 PPP1R13BQ96KQ4 1090 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 XPO4Q9C0E2 1151 aaKnown RBP14.66□□□□□ -0.06
CCM2-217ENST00000492883 MFSD1Q9H3U5 465 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 SYNCQ9H7C4 482 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 CFAP97Q9P2B7 532 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 CYTH4Q9UIA0 394 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 SH3BP1Q9Y3L3 701 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 NOTCH4Q99466 2003 aa14.66□□□□□ -0.06
CCM2-217ENST00000492883 UNC80Q8N2C7 3258 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 FAM86C2PA6NEL3 165 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 E5RJQ4 531 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 STK25O00506 426 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 MDM4O15151 490 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 SART1O43290 800 aaKnown RBP14.65□□□□□ -0.06
CCM2-217ENST00000492883 TCF3P15923 654 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 FERP16591 822 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 ZXDBP98169 803 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 CDR2Q01850 454 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 GOLGA8FQ08AF8 430 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 GOLGA8DPQ0D2H9 430 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 EFEMP1Q12805 493 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 ZNF77Q15935 545 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 KLHDC10Q6PID8 442 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 ZNF276Q8N554 614 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 IPO4Q8TEX9 1081 aaKnown RBP14.65□□□□□ -0.06
CCM2-217ENST00000492883 CLEC4CQ8WTT0 213 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 SLC20A1Q8WUM9 679 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 EDEM1Q92611 657 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 DNASE1L2Q92874 299 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 FAM149B1Q96BN6 582 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 ASIC4Q96FT7 647 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 SHDQ96IW2 340 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 ANP32EQ9BTT0 268 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 EDEM3Q9BZQ6 932 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 TRPV5Q9NQA5 729 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 ABCC13Q9NSE7 274 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms