RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PDE6C	P51160	858 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	DUSP3	P51452	185 aa	Predicted RBP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	CYP4F2	P78329	520 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	DAB2	P98082	770 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	GRIN1	Q05586	938 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	SPAG1	Q07617	926 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	SMARCB1	Q12824	385 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	DDR2	Q16832	855 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	ANO4	Q32M45	955 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	ZNF568	Q3ZCX4	644 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	TTC22	Q5TAA0	569 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	NT5DC1	Q5TFE4	455 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	CDCP2	Q5VXM1	449 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	IGF2-AS	Q6U949	168 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	DHX32	Q7L7V1	743 aa	Known RBP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	KANSL1	Q7Z3B3	1105 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	LRRTM3	Q86VH5	581 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	ETFBKMT	Q8IXQ9	262 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	ADGRG4	Q8IZF6	3080 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	DEPTOR	Q8TB45	409 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	PIGO	Q8TEQ8	1089 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	SCFD1	Q8WVM8	642 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	PRCC	Q92733	491 aa	Predicted RBP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	MIB2	Q96AX9	1013 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	BIRC7	Q96CA5	298 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	KIFC3	Q9BVG8	833 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	OSBPL2	Q9H1P3	480 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	PCED1A	Q9H1Q7	454 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	CDT1	Q9H211	546 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	KDM4C	Q9H3R0	1056 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	SMPD4	Q9NXE4	827 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	DDX25	Q9UHL0	483 aa	Known RBP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	MED13	Q9UHV7	2174 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	PCDHB5	Q9Y5E4	795 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	CPQ	Q9Y646	472 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	DENND4C	Q5VZ89	1909 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	SPG11	Q96JI7	2443 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	CRYBG3	Q68DQ2	2970 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	MTOR	P42345	2549 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602		A0A087WWV3	80 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602		A0A1W2PNU3	283 aa	Predicted RBP	5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	WIPF3	A6NGB9	483 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	CDRT15L2	A8MXV6	281 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	PRRT4	C9JH25	899 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	GFRA2	O00451	464 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	VILL	O15195	856 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	YKT6	O15498	198 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	SLC37A4	O43826	429 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	OPA1	O60313	960 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	RTN2	O75298	545 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	SEMA7A	O75326	666 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	NOL4	O94818	638 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	SLITRK3	O94933	977 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	CHML	P26374	656 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	CD27	P26842	260 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	LRPAP1	P30533	357 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	ACSL1	P33121	698 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	UQCRFS1	P47985	274 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	CD97	P48960	835 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	NLRP5	P59047	1200 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	GSE1	Q14687	1217 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	NAA30	Q147X3	362 aa	Predicted RBP	5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	SAFB	Q15424	915 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	TGIF1	Q15583	401 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	PROX2	Q3B8N5	592 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	GRAMD4	Q6IC98	578 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	THEM5	Q8N1Q8	247 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	ARL14	Q8N4G2	192 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	ZSCAN1	Q8NBB4	408 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	BSND	Q8WZ55	320 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	HPS3	Q969F9	1004 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	SKA1	Q96BD8	255 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	RNF25	Q96BH1	459 aa	Predicted RBP	5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	TRMT2B	Q96GJ1	504 aa	Known RBP	5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	SENP8	Q96LD8	212 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	MYRFL	Q96LU7	910 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	TCEANC2	Q96MN5	208 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	TCHP	Q9BT92	498 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	ABCG4	Q9H172	646 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	ADNP	Q9H2P0	1102 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	ANKEF1	Q9NU02	776 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	DNAJC17	Q9NVM6	304 aa	Known RBP	5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	CFAP97	Q9P2B7	532 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	DKK3	Q9UBP4	350 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	DAXX	Q9UER7	740 aa	Predicted RBP	5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	TNFSF13B	Q9Y275	285 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	STON1	Q9Y6Q2	735 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	MYOF	Q9NZM1	2061 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	OBSL1	O75147	1896 aa		5.77	□□□□□ -1.49
SEC13-219	ENST00000492602	PMS2P1	A4D2B8	440 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	HOXC11	O43248	304 aa	Predicted RBP	5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	ZBTB43	O43298	467 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	SIGLEC6	O43699	453 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	SYNCRIP	O60506	623 aa	Known RBP	5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	TSPAN3	O60637	253 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	VPS4B	O75351	444 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	TNFSF15	O95150	251 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	SEMA4F	O95754	770 aa		5.76	□□□□□ -1.49
SEC13-219	ENST00000492602	CLDN1	O95832	211 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms