RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TBC1D14Q9P2M4 693 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 LRWD1Q9UFC0 647 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 L1RE1Q9UN81 338 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 DNM3Q9UQ16 869 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 PRRT4C9JH25 899 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 HNRNPDLO14979 420 aaKnown RBP14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 OAS1P00973 400 aaKnown RBP14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 NTRK1P04629 796 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 MBL2P11226 248 aaPredicted RBP14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 CDC25AP30304 524 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 GRIK1P39086 918 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 DNAJC3Q13217 504 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 PKDCCQ504Y2 493 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 HES3Q5TGS1 186 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 LAYNQ6UX15 382 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 PRICKLE2Q7Z3G6 844 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 KCNK18Q7Z418 384 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 OSTM1Q86WC4 334 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 SNX29Q8TEQ0 813 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 TTC9Q92623 222 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 LGMNQ99538 433 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 ITM2CQ9NQX7 267 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 IL17BQ9UHF5 180 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 ANKRD6Q9Y2G4 727 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 PCDHB6Q9Y5E3 794 aa14.62□□□□□ -0.07
EXOSC3-207ENST00000490516 A0A0B4J269 797 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 E2F8A0AVK6 867 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 H0Y8X5 98 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 PCDHGA12O60330 932 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 GUCY2CP25092 1073 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 ACTN2P35609 894 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 MAGEA11P43364 429 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 ACOT2P49753 483 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 CCT8P50990 548 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 TPMTP51580 245 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 AFF3P51826 1226 aaKnown RBP14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 MYL7Q01449 175 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 FUT11Q495W5 492 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 KCNT1Q5JUK3 1230 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 GRAMD4Q6IC98 578 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 DENND5BQ6ZUT9 1274 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 METTL3Q86U44 580 aaKnown RBP14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 SNX19Q92543 992 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 FUBP3Q96I24 572 aaKnown RBP eCLIP14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 SPATA17Q96L03 361 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 MKRN2Q9H000 416 aaKnown RBP14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 SPHK2Q9NRA0 654 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 DNAJC17Q9NVM6 304 aaKnown RBP14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 NXF1Q9UBU9 619 aaKnown RBP14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 C2CD2Q9Y426 696 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 PCDHGA1Q9Y5H4 931 aa14.61□□□□□ -0.07
EXOSC3-207ENST00000490516 PP2D1A8MPX8 630 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 ENC1O14682 589 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 ATP2C2O75185 946 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 RFPL3O75679 317 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 TMPRSS3P57727 454 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 TBC1D25Q3MII6 688 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 SCARA3Q6AZY7 606 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 SLC39A4Q6P5W5 647 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 DDX42Q86XP3 938 aaKnown RBP eCLIP14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 BBS7Q8IWZ6 715 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 SCFD1Q8WVM8 642 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 IGSF8Q969P0 613 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 OTUB2Q96DC9 234 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 MED8Q96G25 268 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 ZNF560Q96MR9 790 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 TTLL2Q9BWV7 592 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 ASB7Q9H672 318 aa14.6□□□□□ -0.07
EXOSC3-207ENST00000490516 NPHP3-ACAD11A0A0J9YXS1 232 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 PFKFB2O60825 505 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 HUS1O60921 280 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 BDNFP23560 247 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 ADSSP30520 456 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 NCKAP1LP55160 1127 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 FBXL19Q6PCT2 694 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 GATAD2AQ86YP4 633 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 WBP2Q969T9 261 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 TIPINQ9BVW5 301 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 TRIM9Q9C026 710 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 PDRG1Q9NUG6 133 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 MAGEC2Q9UBF1 373 aaPredicted RBP14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 KCNG1Q9UIX4 513 aa14.59□□□□□ -0.07
EXOSC3-207ENST00000490516 TEP1Q99973 2627 aaKnown RBP14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 NEDD8-MDP1E9PL57 170 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 PIGRP01833 764 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 PSMC1P62191 440 aaKnown RBP14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 TAF10Q12962 218 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 BROXQ5VW32 411 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 FAM171BQ6P995 826 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 FAM124AQ86V42 546 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 CACUL1Q86Y37 369 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 TMEM86AQ8N2M4 240 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 MYLPFQ96A32 169 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 CNDP2Q96KP4 475 aaKnown RBP14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 TM9SF3Q9HD45 589 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 SH3BP1Q9Y3L3 701 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 STON1Q9Y6Q2 735 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 PLXNA2O75051 1894 aa14.58□□□□□ -0.08
EXOSC3-207ENST00000490516 CKAP5Q14008 2032 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms