RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PPP4R3AQ6IN85 833 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 USP37Q86T82 979 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 C12orf40Q86WS4 652 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 ZCCHC9Q8N567 271 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 STKLD1Q8NE28 680 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 MCPH1Q8NEM0 835 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 C1orf216Q8TAB5 229 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 SH3RF2Q8TEC5 729 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 SNRNP27Q8WVK2 155 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 MRPS31Q92665 395 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 TMEM176AQ96HP8 235 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 CYP2S1Q96SQ9 504 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 CCDC94Q9BW85 323 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 RNF26Q9BY78 433 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 TMEM206Q9H813 350 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 CPNE5Q9HCH3 593 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 SH3GLB2Q9NR46 395 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 NFE2L3Q9Y4A8 694 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 NUMA1Q14980 2115 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 CCDC196A0A1B0GTZ2 297 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 PPEF2O14830 753 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 ZNF217O75362 1048 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 CKMP06732 381 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 THBS1P07996 1170 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 HAPLN1P10915 354 aaPredicted RBP7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 PROZP22891 400 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 DGKGP49619 791 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 NLRP5P59047 1200 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 PTK2Q05397 1052 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 SLC10A6Q3KNW5 377 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 TBC1D25Q3MII6 688 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 SLC39A12Q504Y0 691 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 CCDC157Q569K6 752 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 WDR45BQ5MNZ6 344 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 SYCP2LQ5T4T6 812 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 SLCO4C1Q6ZQN7 724 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 MIB1Q86YT6 1006 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 BLIDQ8IZY5 108 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 LRRC15Q8TF66 581 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 BTBD6Q96KE9 485 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 PNKPQ96T60 521 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 ACO2Q99798 780 aaKnown RBP7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 KRTAP4-7Q9BYR0 210 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 GCNT4Q9P109 453 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 AK5Q9Y6K8 562 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 STK36Q9NRP7 1315 aa7.69□□□□□ -1.18
PDLIM1-203ENST00000490391 PDZD2O15018 2839 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 SCN1AP35498 2009 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 MEN1O00255 615 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 APODP05090 189 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 USP17L7P0C7H9 530 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 XRCC6P12956 609 aaKnown RBP eCLIP7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 HOXB2P14652 356 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 JUPP14923 745 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 GCFC2P16383 781 aaKnown RBP7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 IFNAR1P17181 557 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 HNF1BP35680 557 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 GRIA2P42262 883 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 GRK6P43250 576 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 TNFRSF4P43489 277 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 CCR10P46092 362 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 EFNA5P52803 228 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 TMPRSS3P57727 454 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 TARDBPQ13148 414 aaKnown RBP eCLIP7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 ZBTB6Q15916 424 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 TAF12Q16514 161 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 ZNF568Q3ZCX4 644 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 ARHGAP40Q5TG30 622 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 ARMCX5Q6P1M9 558 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 IL27RAQ6UWB1 636 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 ZNF574Q6ZN55 896 aaPredicted RBP7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 USP49Q70CQ1 688 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 TAS1R3Q7RTX0 852 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 LRRTM3Q86VH5 581 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 TTC16Q8NEE8 873 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 DEPTORQ8TB45 409 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 SPATA18Q8TC71 538 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 CCDC43Q96MW1 224 aaKnown RBP7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 SLC26A6Q9BXS9 759 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 ZCWPW1Q9H0M4 648 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 ARHGEF4Q9NR80 690 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 ARHGAP26Q9UNA1 814 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 PCDHGA1Q9Y5H4 931 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 SLCO1B1Q9Y6L6 691 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 CACNA1DQ01668 2161 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
PDLIM1-203ENST00000490391 ADGRG4Q8IZF6 3080 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 TRAV19A0A0A6YYK7 116 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 CLEC18AA5D8T8 446 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 C2orf78A6NCI8 922 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 MYMKA6NI61 221 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 ESPNB1AK53 854 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 BCAT2O15382 392 aaPredicted RBP7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 PCDHGA12O60330 932 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 NOL4O94818 638 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 IGHDP01880 384 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 SPATA31C1P0DKV0 1188 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 MCF2P10911 925 aa7.67□□□□□ -1.18
PDLIM1-203ENST00000490391 ATP2B1P20020 1258 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms