RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 FBXO32Q969P5 355 aa12.48□□□□□ -0.41
ACTN4-206ENST00000489451 SYAP1Q96A49 352 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-206ENST00000489451 P2RY11Q96G91 374 aa12.48□□□□□ -0.41
ACTN4-206ENST00000489451 SLITRK1Q96PX8 696 aa12.48□□□□□ -0.41
ACTN4-206ENST00000489451 SMOQ99835 787 aa12.48□□□□□ -0.41
ACTN4-206ENST00000489451 EDEM2Q9BV94 578 aa12.48□□□□□ -0.41
ACTN4-206ENST00000489451 GMIPQ9P107 970 aa12.48□□□□□ -0.41
ACTN4-206ENST00000489451 CHORDC1Q9UHD1 332 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-206ENST00000489451 NBEAQ8NFP9 2946 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 GIPC1O14908 333 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 TRIM24O15164 1050 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 EXOC3O60645 756 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 KAT7O95251 611 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 CAVIN2O95810 425 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 TIE1P35590 1138 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 EIF2DP41214 584 aaKnown RBP12.47□□□□□ -0.41
ACTN4-206ENST00000489451 MRPS21P82921 87 aaKnown RBP12.47□□□□□ -0.41
ACTN4-206ENST00000489451 DNM1Q05193 864 aaKnown RBP12.47□□□□□ -0.41
ACTN4-206ENST00000489451 KDSRQ06136 332 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 TRPC3Q13507 836 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 ZNF699Q32M78 642 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 ZACNQ401N2 412 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 KMT5BQ4FZB7 885 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 SPOPLQ6IQ16 392 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 GPRIN1Q7Z2K8 1008 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 ACOT1Q86TX2 421 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 SLC9A9Q8IVB4 645 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 BBS7Q8IWZ6 715 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 TMEM174Q8WUU8 243 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 RLN3Q8WXF3 142 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 OVCA2Q8WZ82 227 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 EXOC4Q96A65 974 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 PAGE5Q96GU1 130 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 TWNKQ96RR1 684 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 PNKPQ96T60 521 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 KRT82Q9NSB4 513 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 OSER1Q9NX31 292 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 EHD2Q9NZN4 543 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 CGNQ9P2M7 1197 aaKnown RBP12.47□□□□□ -0.41
ACTN4-206ENST00000489451 MBD1Q9UIS9 605 aaPredicted RBP12.47□□□□□ -0.41
ACTN4-206ENST00000489451 IGF2RP11717 2491 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 CEP192Q8TEP8 1941 aa12.47□□□□□ -0.41
ACTN4-206ENST00000489451 WDFY3Q8IZQ1 3526 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 E2F8A0AVK6 867 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 HHLA1C9JL84 531 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 CDX4O14627 284 aaPredicted RBP12.46□□□□□ -0.41
ACTN4-206ENST00000489451 RHOBTB1O94844 696 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 RTN3O95197 1032 aaPredicted RBP12.46□□□□□ -0.41
ACTN4-206ENST00000489451 KCNK5O95279 499 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 KLF8O95600 359 aaPredicted RBP12.46□□□□□ -0.41
ACTN4-206ENST00000489451 ADH5P11766 374 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 GBP1P32455 592 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 P2RY2P41231 377 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 ASPAP45381 313 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 ME1P48163 572 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 NDST1P52848 882 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 BIRC3Q13489 604 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 ELF2Q15723 593 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 ZNF667Q5HYK9 610 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 RNF43Q68DV7 783 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 TMEM25Q86YD3 366 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 MIB1Q86YT6 1006 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 C12orf29Q8N999 325 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 DUSP9Q99956 384 aaKnown RBP12.46□□□□□ -0.41
ACTN4-206ENST00000489451 ADAM33Q9BZ11 813 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 APOBEC3GQ9HC16 384 aaKnown RBP12.46□□□□□ -0.41
ACTN4-206ENST00000489451 CSNK1G1Q9HCP0 422 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 CD248Q9HCU0 757 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 DMAP1Q9NPF5 467 aaPredicted RBP12.46□□□□□ -0.41
ACTN4-206ENST00000489451 RCOR1Q9UKL0 485 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 WASF3Q9UPY6 502 aa12.46□□□□□ -0.41
ACTN4-206ENST00000489451 PCDH15Q96QU1 1955 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 ASCC3Q8N3C0 2202 aaKnown RBP12.45□□□□□ -0.42
ACTN4-206ENST00000489451 ADAMTS20P59510 1910 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 ADAMTS9Q9P2N4 1935 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 EIF4E1BA6NMX2 242 aaKnown RBP12.45□□□□□ -0.42
ACTN4-206ENST00000489451 C4orf47A7E2U8 309 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 SLC9A3R1O14745 358 aaPredicted RBP12.45□□□□□ -0.42
ACTN4-206ENST00000489451 HOXC11O43248 304 aaPredicted RBP12.45□□□□□ -0.42
ACTN4-206ENST00000489451 PHACTR2O75167 634 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 TULP3O75386 442 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 AP1G2O75843 785 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 TBX18O95935 607 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 ASS1P00966 412 aaKnown RBP12.45□□□□□ -0.42
ACTN4-206ENST00000489451 SLFN14P0C7P3 912 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 TUBP50607 506 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 FOXC1Q12948 553 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 MAP7D1Q3KQU3 841 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 USP39Q53GS9 565 aaKnown RBP12.45□□□□□ -0.42
ACTN4-206ENST00000489451 SOWAHCQ53LP3 525 aaPredicted RBP12.45□□□□□ -0.42
ACTN4-206ENST00000489451 HECTD3Q5T447 861 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 PSAPL1Q6NUJ1 521 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 SV2AQ7L0J3 742 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 CRYBG2Q8N1P7 616 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 NAT16Q8N8M0 369 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 PDZD8Q8NEN9 1154 aa12.45□□□□□ -0.42
ACTN4-206ENST00000489451 SLC2A14Q8TDB8 520 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms