RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 RNF149Q8NC42 400 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 SH3RF2Q8TEC5 729 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 PIBF1Q8WXW3 757 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 BIRC7Q96CA5 298 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 CATSPER2Q96P56 530 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 SLC22A12Q96S37 553 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 C22orf23Q9BZE7 217 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 TRIM8Q9BZR9 551 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 ABCG4Q9H172 646 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 OSBPL2Q9H1P3 480 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 SEMA6CQ9H3T2 930 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 TMEM206Q9H813 350 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 ANO2Q9NQ90 1003 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 TBC1D22BQ9NU19 505 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 HSFX1Q9UBD0 423 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 TCEAL9Q9UHQ7 104 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 RYR3Q15413 4870 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 POLEQ07864 2286 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 ANAPC1Q9H1A4 1944 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 PRRC2AP48634 2157 aaKnown RBP8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 CCDC187A0A096LP49 1063 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 A0A1B0GUA9 196 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 EFCAB7A8K855 629 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 PRSS44E7EML9 344 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 FAM86B1E9PN63 330 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 K7EM74 188 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 B4GALT5O43286 388 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 JAK2O60674 1132 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 RAB11FIP3O75154 756 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 FAM86B2P0C5J1 330 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 TGM2P21980 687 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 ITGA3P26006 1051 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 NT5C2P49902 561 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 KRTAP10-9P60411 292 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 VEPH1Q14D04 833 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 FUT11Q495W5 492 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 GLRA4Q5JXX5 417 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 TTC22Q5TAA0 569 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 DTX1Q86Y01 620 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 ETFBKMTQ8IXQ9 262 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 TERB1Q8NA31 727 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 RDH13Q8NBN7 331 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 PSPC1Q8WXF1 523 aaKnown RBP8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 MRPS31Q92665 395 aaKnown RBP8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 DDX12PQ92771 950 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 SLITRK1Q96PX8 696 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 JPH2Q9BR39 696 aaPredicted RBP8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 GDF3Q9NR23 364 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 DLL4Q9NR61 685 aa8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 RPH3AQ9Y2J0 694 aaPredicted RBP8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 KMT2CQ8NEZ4 4911 aaKnown RBP8.11□□□□□ -1.11
EXOSC3-206ENST00000489414 IGLV3-22A0A075B6J6 115 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 KCNAB3O43448 404 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 TADA3O75528 432 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 LARGE1O95461 756 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 USP17L7P0C7H9 530 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 PDX1P52945 283 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 ART1P52961 327 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 PTENP60484 403 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 MBTD1Q05BQ5 628 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 SOX4Q06945 474 aaPredicted RBP8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 ZC2HC1CQ53FD0 456 aaPredicted RBP8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 XKR3Q5GH77 459 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 RHBDF2Q6PJF5 856 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 PLA2G4DQ86XP0 818 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 TGIF2LYQ8IUE0 185 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 APPL2Q8NEU8 664 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 MAPK15Q8TD08 544 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 OTUD7AQ8TE49 926 aaPredicted RBP8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 SUSD3Q96L08 255 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 SLC6A18Q96N87 628 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 CYP2S1Q96SQ9 504 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 ZNF577Q9BSK1 485 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 RNF41Q9H4P4 317 aaPredicted RBP8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 DISC1Q9NRI5 854 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 ABCA4P78363 2273 aa8.1□□□□□ -1.11
EXOSC3-206ENST00000489414 INO80B-WBP1J3KQ70 363 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 PODXLO00592 558 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 PLD2O14939 933 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 OAZ2O95190 189 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 CKMP06732 381 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 ADH5P11766 374 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 HMGA1P17096 107 aaKnown RBP8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 KLK2P20151 261 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 ACSL1P33121 698 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 CLCN1P35523 988 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 ZXDBP98169 803 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 TAF12Q16514 161 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 IFIT1BQ5T764 474 aaKnown RBP8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 RBM44Q6ZP01 1051 aaKnown RBP8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 FILIP1Q7Z7B0 1213 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 JAMLQ86YT9 394 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 TMEM143Q96AN5 459 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 SKA1Q96BD8 255 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 PGBD1Q96JS3 809 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 OXCT2Q9BYC2 517 aaPredicted RBP8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 ERVMER34-1Q9H9K5 563 aa8.09□□□□□ -1.11
EXOSC3-206ENST00000489414 CKAP5Q14008 2032 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms