RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 FOXD4L5Q5VV16 416 aaPredicted RBP9.93□□□□□ -0.82
SNX17-207ENST00000489402 LYSMD4Q5XG99 296 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 ARMCX6Q7L4S7 300 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 C12orf40Q86WS4 652 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 SYT12Q8IV01 421 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 C12orf56Q8IXR9 622 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 ZNF513Q8N8E2 541 aaPredicted RBP9.93□□□□□ -0.82
SNX17-207ENST00000489402 SCFD1Q8WVM8 642 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 FOXD4L4Q8WXT5 416 aaPredicted RBP9.93□□□□□ -0.82
SNX17-207ENST00000489402 XYLT2Q9H1B5 865 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 SLC32A1Q9H598 525 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 SMYD3Q9H7B4 428 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 KRT82Q9NSB4 513 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 COMMD8Q9NX08 183 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 DEC1Q9P2X7 70 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 CHORDC1Q9UHD1 332 aaPredicted RBP9.93□□□□□ -0.82
SNX17-207ENST00000489402 MYOFQ9NZM1 2061 aa9.93□□□□□ -0.82
SNX17-207ENST00000489402 TNRC6BQ9UPQ9 1833 aaKnown RBP9.93□□□□□ -0.82
SNX17-207ENST00000489402 MYH10P35580 1976 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 CNOT1A5YKK6 2376 aaKnown RBP9.92□□□□□ -0.82
SNX17-207ENST00000489402 A0A0A0MRY4 1105 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
SNX17-207ENST00000489402 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 K7ELQ4 463 aaPredicted RBP9.92□□□□□ -0.82
SNX17-207ENST00000489402 CDX4O14627 284 aaPredicted RBP9.92□□□□□ -0.82
SNX17-207ENST00000489402 HOXC11O43248 304 aaPredicted RBP9.92□□□□□ -0.82
SNX17-207ENST00000489402 AP5Z1O43299 807 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 PROS1P07225 676 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 IRF1P10914 325 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 CASP4P49662 377 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 GOLGA8FQ08AF8 430 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 GOLGA8DPQ0D2H9 430 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 NCOA4Q13772 614 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 KNOP1Q1ED39 458 aaKnown RBP9.92□□□□□ -0.82
SNX17-207ENST00000489402 BMT2Q1RMZ1 405 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 FOXD4L6Q3SYB3 417 aaPredicted RBP9.92□□□□□ -0.82
SNX17-207ENST00000489402 C10orf76Q5T2E6 689 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 EMC10Q5UCC4 262 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 SNX30Q5VWJ9 437 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 SHC4Q6S5L8 630 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 UNQ6494/PRO21346Q6UXR6 183 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 FOXD4L3Q6VB84 417 aaPredicted RBP9.92□□□□□ -0.82
SNX17-207ENST00000489402 SCARA5Q6ZMJ2 495 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 TMEFF1Q8IYR6 380 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 NAT16Q8N8M0 369 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 GOLGA5Q8TBA6 731 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 KCNV2Q8TDN2 545 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 KCNK16Q96T55 309 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 BLZF1Q9H2G9 400 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 FBXO44Q9H4M3 255 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 VRTNQ9H8Y1 702 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 SLC39A2Q9NP94 309 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 FAM13BQ9NYF5 915 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 CHD6Q8TD26 2715 aa9.92□□□□□ -0.82
SNX17-207ENST00000489402 NBEAQ8NFP9 2946 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 LAMA5O15230 3695 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 PVALEFA0A1B0GWK0 134 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 POLR2DO15514 142 aaKnown RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 ADAM23O75077 832 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 TULP3O75386 442 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 AP1G2O75843 785 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 TOP3BO95985 862 aaKnown RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 CFIP05156 583 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 HOXB2P14652 356 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 HOXD12P35452 270 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 PTGER3P43115 390 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 AFMP43652 599 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 MAPK8P45983 427 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 ATXN3P54252 364 aaPredicted RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 CDH8P55286 799 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 RPL6Q02878 288 aaKnown RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 EHHADHQ08426 723 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 GRAMD4Q6IC98 578 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 SDE2Q6IQ49 451 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 SLC23A3Q6PIS1 610 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 SLC36A4Q6YBV0 504 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 RABEPKQ7Z6M1 372 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 ACOT1Q86TX2 421 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 BBS7Q8IWZ6 715 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 ETFBKMTQ8IXQ9 262 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 GRAMD1CQ8IYS0 662 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 PHTF2Q8N3S3 785 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 TERB1Q8NA31 727 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 DEFB124Q8NES8 71 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 SCAMP5Q8TAC9 235 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 ZFRQ96KR1 1074 aaKnown RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 XPO6Q96QU8 1125 aaKnown RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 DUSP9Q99956 384 aaKnown RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 SDCBP2Q9H190 292 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 CCSER2Q9H7U1 834 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 TLR8Q9NR97 1041 aaKnown RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 SPHK2Q9NRA0 654 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 IL37Q9NZH6 218 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 GMIPQ9P107 970 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 MBD1Q9UIS9 605 aaPredicted RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 LSM7Q9UK45 103 aaKnown RBP9.91□□□□□ -0.82
SNX17-207ENST00000489402 HCN2Q9UL51 889 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 CEP192Q8TEP8 1941 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 CEP295Q9C0D2 2601 aa9.91□□□□□ -0.82
SNX17-207ENST00000489402 ATXN2Q99700 1313 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms