RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 POMGNT1Q8WZA1 660 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 MOCOSQ96EN8 888 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 C11orf70Q9BRQ4 267 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 WWP1Q9H0M0 922 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 AGPAT3Q9NRZ7 376 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 TBC1D23Q9NUY8 699 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 KDM3AQ9Y4C1 1321 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 CYP11B1P15538 503 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 GDF10P55107 478 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 C21orf59P57076 290 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 BASP1P80723 227 aaKnown RBP16.79■□□□□ 0.28
MCF2L-229ENST00000488765 DCDC5Q6ZRR9 648 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 CRLF3Q8IUI8 442 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 LMO3Q8TAP4 145 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 WDR83Q9BRX9 315 aaKnown RBP16.79■□□□□ 0.28
MCF2L-229ENST00000488765 EPB41L1Q9H4G0 881 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 FADS3Q9Y5Q0 445 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 NOX1Q9Y5S8 564 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 GPC6Q9Y625 555 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-229ENST00000488765 A0A1W2PPW3 197 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 BBOX1O75936 387 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 GDF11O95390 407 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 PTPN1P18031 435 aaKnown RBP16.78■□□□□ 0.28
MCF2L-229ENST00000488765 CDH3P22223 829 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 NKX2-5P52952 324 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-229ENST00000488765 ABCB5Q2M3G0 1257 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 SBK1Q52WX2 424 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 TXNRD3NBQ6F5E7 133 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 PLEKHA7Q6IQ23 1121 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 TRIM72Q6ZMU5 477 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 ERI1Q8IV48 349 aaKnown RBP16.78■□□□□ 0.28
MCF2L-229ENST00000488765 FAM178BQ8IXR5 827 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 DCAKDQ8WVC6 231 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 ZFRQ96KR1 1074 aaKnown RBP16.78■□□□□ 0.28
MCF2L-229ENST00000488765 CBWD1Q9BRT8 395 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 TPK1Q9H3S4 243 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 TOPORSQ9NS56 1045 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-229ENST00000488765 STX16-NPEPL1H3BU86 382 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 POLRMTO00411 1230 aaKnown RBP16.78■□□□□ 0.28
MCF2L-229ENST00000488765 ALOX15BO15296 676 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 ZBED1O96006 694 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 ABHD2P08910 425 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 TUFMP49411 452 aaKnown RBP16.78■□□□□ 0.28
MCF2L-229ENST00000488765 UBXN2AP68543 259 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 MARVELD2Q8N4S9 558 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 SLCO2A1Q92959 643 aa16.78■□□□□ 0.28
MCF2L-229ENST00000488765 NOCTQ9UK39 431 aaKnown RBP16.78■□□□□ 0.28
MCF2L-229ENST00000488765 CBFA2T3O75081 653 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 UGT1A6P19224 532 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 UGT1A1P22309 533 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 UGT1A4P22310 534 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 KCNA4P22459 653 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 UGT1A3P35503 534 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 UGT1A5P35504 534 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 ETV4P43268 484 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 PHKA2P46019 1235 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 EIF3EP60228 445 aaKnown RBP16.77■□□□□ 0.28
MCF2L-229ENST00000488765 CTBSQ01459 385 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 MFSD7Q6UXD7 560 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 OGFOD1Q8N543 542 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 DDHD1Q8NEL9 900 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 TRIM11Q96F44 468 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 Q9H521 79 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 HOMER2Q9NSB8 354 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 GTF3C4Q9UKN8 822 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 STRIP2Q9ULQ0 834 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 RABGAP1Q9Y3P9 1069 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 BTBD19C9JJ37 291 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 PSMD12O00232 456 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-229ENST00000488765 MATN2O00339 956 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 EML1O00423 815 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 TM9SF1O15321 606 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 KLHL41O60662 606 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 ALDH2P05091 517 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 RHBDL3P58872 404 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 SEPT6Q14141 434 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 PERM1Q5SV97 790 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 MROH9Q5TGP6 573 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 PRR23BQ6ZRT6 265 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 ADGRF4Q8IZF3 695 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 LILRA2Q8N149 483 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 HPS1Q92902 700 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 UVRAGQ9P2Y5 699 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 ARHGAP26Q9UNA1 814 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 DNAJC16Q9Y2G8 782 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 AHDC1Q5TGY3 1603 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-229ENST00000488765 ANKRD36CQ5JPF3 1778 aa16.77■□□□□ 0.28
MCF2L-229ENST00000488765 GTPBP10A4D1E9 387 aaKnown RBP16.77■□□□□ 0.27
MCF2L-229ENST00000488765 SF3B4Q15427 424 aaKnown RBP eCLIP16.77■□□□□ 0.272e-9■□□□□ 11
MCF2L-229ENST00000488765 USH1GQ495M9 461 aa16.77■□□□□ 0.27
MCF2L-229ENST00000488765 EFHC2Q5JST6 749 aa16.77■□□□□ 0.27
MCF2L-229ENST00000488765 AAGABQ6PD74 315 aa16.77■□□□□ 0.27
MCF2L-229ENST00000488765 TDRPQ86YL5 185 aa16.77■□□□□ 0.27
MCF2L-229ENST00000488765 WDR75Q8IWA0 830 aaKnown RBP16.77■□□□□ 0.27
MCF2L-229ENST00000488765 BBOF1Q8ND07 529 aa16.77■□□□□ 0.27
MCF2L-229ENST00000488765 PLEKHA8Q96JA3 519 aa16.77■□□□□ 0.27
MCF2L-229ENST00000488765 NAA50Q9GZZ1 169 aaKnown RBP16.77■□□□□ 0.27
MCF2L-229ENST00000488765 KCNK4Q9NYG8 393 aa16.77■□□□□ 0.27
MCF2L-229ENST00000488765 GIPC1O14908 333 aa16.76■□□□□ 0.27
MCF2L-229ENST00000488765 SLC16A3O15427 465 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms